PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BjunContig427_373084_6393910032780 Rosmarinic Acid CPR low borderline
BjunContig79090048690 Rosmarinic Acid CPR low borderline
BjunContig82090049130 Rosmarinic Acid CPR low borderline
BjunSuper_scaffold_184_753382_15810110060680 Rosmarinic Acid CPR medium pass
BjunA06G0006600 Rosmarinic Acid HPPR medium pass
BjunA07G0019720 Rosmarinic Acid HPPR medium pass
BjunA07G0033170 Rosmarinic Acid HPPR medium pass
BjunA09G0049600 Rosmarinic Acid HPPR medium pass
BjunA09G0049610 Rosmarinic Acid HPPR medium pass
BjunB02G0019340 Rosmarinic Acid HPPR medium pass
BjunB02G0019350 Rosmarinic Acid HPPR medium pass
BjunB02G0019360 Rosmarinic Acid HPPR low borderline
BjunB04G0020250 Rosmarinic Acid HPPR medium pass
BjunB05G0007470 Rosmarinic Acid HPPR low borderline
BjunB06G0018330 Rosmarinic Acid HPPR medium pass
BjunB06G0026620 Rosmarinic Acid HPPR medium pass
BjunContig22910017990 Rosmarinic Acid HPPR medium pass
BjunA02G0001330 Rosmarinic Acid PAL medium pass
BjunA04G0004880 Rosmarinic Acid PAL medium pass
BjunA04G0004890 Rosmarinic Acid PAL high pass
BjunA04G0011110 Rosmarinic Acid PAL high pass
BjunA04G0020780 Rosmarinic Acid PAL high pass
BjunA05G0006870 Rosmarinic Acid PAL high pass
BjunB01G0007680 Rosmarinic Acid PAL high pass
BjunB05G0006050 Rosmarinic Acid PAL high pass
BjunB05G0006580 Rosmarinic Acid PAL medium pass
BjunB05G0024920 Rosmarinic Acid PAL medium pass
BjunB05G0024930 Rosmarinic Acid PAL high pass
BjunB06G0005800 Rosmarinic Acid PAL high pass
BjunB06G0033000 Rosmarinic Acid PAL low borderline
BjunB06G0037280 Rosmarinic Acid PAL high pass
BjunB08G0017300 Rosmarinic Acid PAL high pass
BjunB08G0045240 Rosmarinic Acid PAL high pass
BjunContig444_592386_2116916_1449544_14826490034100 Rosmarinic Acid PAL high pass
BjunA01G0002270 Rosmarinic Acid RAS low borderline
BjunA01G0016380 Rosmarinic Acid RAS low borderline
BjunA01G0017410 Rosmarinic Acid RAS medium borderline
BjunA01G0022150 Rosmarinic Acid RAS low borderline
BjunA02G0009470 Rosmarinic Acid RAS low borderline
BjunA02G0028360 Rosmarinic Acid RAS low borderline
BjunA03G0009620 Rosmarinic Acid RAS medium pass
BjunA03G0009630 Rosmarinic Acid RAS medium pass
BjunA03G0014480 Rosmarinic Acid RAS low borderline
BjunA04G0022470 Rosmarinic Acid RAS medium pass
BjunA05G0004640 Rosmarinic Acid RAS low borderline
BjunA05G0005640 Rosmarinic Acid RAS low borderline
BjunA05G0024180 Rosmarinic Acid RAS low borderline
BjunA06G0023390 Rosmarinic Acid RAS medium pass
BjunA06G0033940 Rosmarinic Acid RAS low borderline
BjunA07G0000540 Rosmarinic Acid RAS medium pass