PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BjunA02G0034050 Steroid SQE medium pass
BjunA04G0006030 Steroid SQE medium pass
BjunA04G0013230 Steroid SQE medium pass
BjunA06G0023850 Steroid SQE medium pass
BjunA06G0023860 Steroid SQE medium pass
BjunA08G0007520 Steroid SQE low borderline
BjunA09G0005430 Steroid SQE medium pass
BjunA09G0015180 Steroid SQE medium pass
BjunA09G0015330 Steroid SQE medium pass
BjunB02G0003430 Steroid SQE medium pass
BjunB02G0047230 Steroid SQE medium pass
BjunB05G0001950 Steroid SQE medium pass
BjunB07G0015330 Steroid SQE medium pass
BjunContig16320010410 Steroid SQE medium pass
BjunContig1968_1_657310014340 Steroid SQE low borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470068260 Steroid SQE medium pass
BjunSuper_scaffold_5_1_6334723_245229_7451470068270 Steroid SQE medium pass
BjunSuper_scaffold_5_1_6334723_245229_7451470068280 Steroid SQE medium pass
BjunA02G0006140 Steroid SQS/FDFT1 medium pass
BjunA03G0006150 Steroid SQS/FDFT1 medium pass
BjunA03G0046600 Steroid SQS/FDFT1 low borderline
BjunA03G0050350 Steroid SQS/FDFT1 high pass
BjunA03G0050380 Steroid SQS/FDFT1 high pass
BjunA09G0012450 Steroid SQS/FDFT1 low borderline
BjunA10G0015990 Steroid SQS/FDFT1 medium pass
BjunB02G0025380 Steroid SQS/FDFT1 medium pass
BjunB02G0054500 Steroid SQS/FDFT1 high pass
BjunB03G0015100 Steroid SQS/FDFT1 high pass
BjunB04G0015260 Steroid SQS/FDFT1 low borderline
BjunB05G0003660 Steroid SQS/FDFT1 high pass
BjunB05G0004990 Steroid SQS/FDFT1 high pass
BjunB05G0005000 Steroid SQS/FDFT1 high pass
BjunB08G0019290 Steroid SQS/FDFT1 high pass
BjunB08G0022250 Steroid SQS/FDFT1 medium pass