PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BjunB05G0001070 Alkaloid IO medium borderline
BjunB06G0011880 Alkaloid IO medium borderline
BjunB06G0017180 Alkaloid IO medium borderline
BjunB06G0032860 Alkaloid IO medium borderline
BjunB06G0037310 Alkaloid IO medium borderline
BjunB07G0028520 Alkaloid IO medium borderline
BjunB08G0025180 Alkaloid IO medium borderline
BjunB08G0035020 Alkaloid IO medium borderline
BjunContig12320005220 Alkaloid IO medium borderline
BjunContig668_1_4839870044250 Alkaloid IO medium pass
BjunContig7050045070 Alkaloid IO medium borderline
BjunSuper_scaffold_120_122617_7993060055500 Alkaloid IO medium borderline
BjunSuper_scaffold_127_1637425_3570875_164068_4227960056410 Alkaloid IO low borderline
BjunSuper_scaffold_40_2508543_4711922_1153965_22033800065770 Alkaloid IO medium borderline
BjunSuper_scaffold_5_1_6334723_745148_63347230068620 Alkaloid IO medium borderline
BjunSuper_scaffold_5_1_6334723_745148_63347230068640 Alkaloid IO medium borderline
BjunSuper_scaffold_84_2683469_28976790074190 Alkaloid IO low borderline
BjunA01G0012570 Alkaloid ISY medium pass
BjunA03G0044770 Alkaloid ISY high pass
BjunA08G0016090 Alkaloid ISY medium pass
BjunA09G0022600 Alkaloid ISY low borderline
BjunA10G0011320 Alkaloid ISY medium pass
BjunB02G0020500 Alkaloid ISY medium pass
BjunB02G0050310 Alkaloid ISY high pass
BjunB03G0010120 Alkaloid ISY medium pass
BjunB04G0027160 Alkaloid ISY medium pass
BjunB05G0012130 Alkaloid ISY medium pass
BjunB08G0028460 Alkaloid ISY low borderline
BjunB08G0038890 Alkaloid ISY low borderline
BjunA01G0001950 Alkaloid LAMT medium pass
BjunA01G0014390 Alkaloid LAMT medium borderline
BjunA01G0021670 Alkaloid LAMT medium borderline
BjunA02G0014810 Alkaloid LAMT medium borderline
BjunA02G0015610 Alkaloid LAMT medium borderline
BjunA03G0001430 Alkaloid LAMT medium borderline
BjunA03G0010450 Alkaloid LAMT medium borderline
BjunA03G0015240 Alkaloid LAMT low borderline
BjunA03G0029680 Alkaloid LAMT medium borderline
BjunA03G0051250 Alkaloid LAMT medium borderline
BjunA05G0027720 Alkaloid LAMT medium borderline
BjunA06G0010640 Alkaloid LAMT medium borderline
BjunA07G0011840 Alkaloid LAMT medium borderline
BjunA07G0014560 Alkaloid LAMT medium borderline
BjunA07G0022820 Alkaloid LAMT medium borderline
BjunA07G0023920 Alkaloid LAMT medium pass
BjunA07G0024000 Alkaloid LAMT medium borderline
BjunA08G0014830 Alkaloid LAMT medium pass
BjunA08G0015220 Alkaloid LAMT low borderline
BjunA08G0017310 Alkaloid LAMT medium borderline
BjunA09G0004330 Alkaloid LAMT medium borderline