PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BjunB02G0003490 Terpenoid HDR/IspH low borderline
BjunB03G0014600 Terpenoid HDR/IspH high pass
BjunB03G0014950 Terpenoid HDR/IspH high pass
BjunB05G0003850 Terpenoid HDR/IspH high pass
BjunA05G0024520 Terpenoid HDS/IspG low borderline
BjunA10G0012810 Terpenoid HDS/IspG high pass
BjunB02G0022050 Terpenoid HDS/IspG high pass
BjunA02G0019670 Terpenoid HMGR medium pass
BjunB03G0043490 Terpenoid HMGR low borderline
BjunA09G0020460 Terpenoid HMGS high pass
BjunB05G0036630 Terpenoid HMGS high pass
BjunB08G0038290 Terpenoid HMGS high pass
BjunA01G0036750 Terpenoid IDI medium pass
BjunA03G0026540 Terpenoid IDI medium pass
BjunB01G0039520 Terpenoid IDI medium pass
BjunB02G0006440 Terpenoid IDI low borderline
BjunB02G0035510 Terpenoid IDI medium pass
BjunB07G0000660 Terpenoid IDI medium pass
BjunB07G0017890 Terpenoid IDI medium pass
BjunContig34460026750 Terpenoid IDI medium pass
BjunA02G0029930 Terpenoid MCT/IspD high pass
BjunA08G0008040 Terpenoid MCT/IspD low borderline
BjunA09G0026460 Terpenoid MCT/IspD low borderline
BjunA09G0053510 Terpenoid MCT/IspD low borderline
BjunB03G0045780 Terpenoid MCT/IspD low borderline
BjunB04G0033910 Terpenoid MCT/IspD low borderline
BjunA07G0002540 Terpenoid MDS/IspF low borderline
BjunA09G0012790 Terpenoid MDS/IspF high pass
BjunB04G0015890 Terpenoid MDS/IspF high pass
BjunB04G0017520 Terpenoid MDS/IspF high pass
BjunA02G0001460 Terpenoid MVD low borderline
BjunA03G0001530 Terpenoid MVD low borderline
BjunA04G0004510 Terpenoid MVD medium pass
BjunA08G0022930 Terpenoid MVD low borderline
BjunA09G0035910 Terpenoid MVD medium pass
BjunA10G0023430 Terpenoid MVD low borderline
BjunB02G0033460 Terpenoid MVD low borderline
BjunB03G0005880 Terpenoid MVD low borderline
BjunB05G0024790 Terpenoid MVD low borderline
BjunB05G0034540 Terpenoid MVD low borderline
BjunB06G0017520 Terpenoid MVD low borderline
BjunB06G0036770 Terpenoid MVD medium pass
BjunB08G0000950 Terpenoid MVD low borderline
BjunB08G0044470 Terpenoid MVD medium pass
BjunA02G0032910 Terpenoid MVK medium pass
BjunA03G0027950 Terpenoid MVK low borderline
BjunA05G0030240 Terpenoid MVK low borderline
BjunA06G0022490 Terpenoid MVK low borderline
BjunA09G0004800 Terpenoid MVK medium pass
BjunA09G0009360 Terpenoid MVK low borderline