PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
BjunB07G0011750 Alkaloid 7DLGT medium pass
BjunB07G0013020 Alkaloid 7DLGT low borderline
BjunB07G0013750 Alkaloid 7DLGT low borderline
BjunB07G0020130 Alkaloid 7DLGT low borderline
BjunB07G0020140 Alkaloid 7DLGT low borderline
BjunB07G0024470 Alkaloid 7DLGT low borderline
BjunB07G0033310 Alkaloid 7DLGT medium pass
BjunB07G0033320 Alkaloid 7DLGT medium pass
BjunB07G0033340 Alkaloid 7DLGT medium pass
BjunB07G0034920 Alkaloid 7DLGT low borderline
BjunB08G0012230 Alkaloid 7DLGT low borderline
BjunB08G0012240 Alkaloid 7DLGT low borderline
BjunB08G0012250 Alkaloid 7DLGT low borderline
BjunB08G0012260 Alkaloid 7DLGT low borderline
BjunB08G0012270 Alkaloid 7DLGT low borderline
BjunB08G0012290 Alkaloid 7DLGT low borderline
BjunB08G0013870 Alkaloid 7DLGT low borderline
BjunB08G0014790 Alkaloid 7DLGT low borderline
BjunB08G0017070 Alkaloid 7DLGT low borderline
BjunB08G0017080 Alkaloid 7DLGT medium pass
BjunB08G0017100 Alkaloid 7DLGT medium pass
BjunB08G0020100 Alkaloid 7DLGT medium pass
BjunB08G0020410 Alkaloid 7DLGT medium pass
BjunB08G0020890 Alkaloid 7DLGT medium pass
BjunB08G0023730 Alkaloid 7DLGT low borderline
BjunB08G0023740 Alkaloid 7DLGT low borderline
BjunB08G0023750 Alkaloid 7DLGT low borderline
BjunB08G0025430 Alkaloid 7DLGT low borderline
BjunB08G0026250 Alkaloid 7DLGT low borderline
BjunB08G0037860 Alkaloid 7DLGT low borderline
BjunB08G0045330 Alkaloid 7DLGT medium pass
BjunB08G0045340 Alkaloid 7DLGT low borderline
BjunB08G0045350 Alkaloid 7DLGT medium pass
BjunB08G0045360 Alkaloid 7DLGT low borderline
BjunB08G0047480 Alkaloid 7DLGT high pass
BjunContig12070004240 Alkaloid 7DLGT medium pass
BjunContig176_1863893_2424353_437358_5604610013270 Alkaloid 7DLGT low borderline
BjunContig197_1_5304640014650 Alkaloid 7DLGT medium pass
BjunContig19920015070 Alkaloid 7DLGT medium pass
BjunContig19920015130 Alkaloid 7DLGT low borderline
BjunContig19920015150 Alkaloid 7DLGT low borderline
BjunContig20240015650 Alkaloid 7DLGT low borderline
BjunContig304_976566_12133190024250 Alkaloid 7DLGT low borderline
BjunContig360_1559862_2342843_1_1213750027390 Alkaloid 7DLGT medium pass
BjunContig51000038570 Alkaloid 7DLGT low borderline
BjunContig5330038940 Alkaloid 7DLGT low borderline
BjunContig6716_57147_1991490044360 Alkaloid 7DLGT low borderline
BjunSuper_scaffold_109_3169392_4351964_52914_5676090054290 Alkaloid 7DLGT medium pass
BjunSuper_scaffold_109_3169392_4351964_52914_5676090054750 Alkaloid 7DLGT low borderline
BjunSuper_scaffold_109_3169392_4351964_52914_5676090054760 Alkaloid 7DLGT medium pass