PlantSME Plant secondary metabolism enzyme database

Brassica nigra (brassica_nigra)

Imported from atlas release summary for Brassica nigra.

2043
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 641 19 BAHD (288) View species results
Phenylpropanoid pathway 428 12 POD (188) View species results
Alkaloid pathway 409 20 7DLGT (76) View species results
Flavonoid pathway 260 12 UFGT (169) View species results
Rosmarinic acid pathway 180 7 C4H (80) View species results
Steroid pathway 125 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2026 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
BnigB1G0002860.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0008170.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0010560.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0015960.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0015970.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0015980.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0016740.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0030900.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0030910.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0030920.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0030930.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0032070.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB1G0039370.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB2G0017530.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB2G0036380.1 Steroid BR6OX2/CYP85A2 medium borderline
BnigB2G0055550.1 Steroid BR6OX2/CYP85A2 medium borderline
BnigB3G0000320.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0005500.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0011900.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0012200.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0017660.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0023240.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0023300.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0027440.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0030250.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0038730.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0038740.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB3G0043780.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0004820.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0009370.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0014210.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0015450.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0018290.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0018490.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0022060.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0037380.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0038160.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0042270.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0043210.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0043600.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB4G0048130.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0009320.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0014800.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0014840.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0029280.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0032770.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0034200.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0034210.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0039320.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0044880.1 Steroid BR6OX2/CYP85A2 low borderline