PlantSME Plant secondary metabolism enzyme database

Brassica nigra (brassica_nigra)

Imported from atlas release summary for Brassica nigra.

2043
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 641 19 BAHD (288) View species results
Phenylpropanoid pathway 428 12 POD (188) View species results
Alkaloid pathway 409 20 7DLGT (76) View species results
Flavonoid pathway 260 12 UFGT (169) View species results
Rosmarinic acid pathway 180 7 C4H (80) View species results
Steroid pathway 125 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2026 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
BnigB5G0045510.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0045530.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0048310.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB5G0050140.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0000010.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0011930.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0016750.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0016760.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0023200.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB6G0024480.1 Steroid BR6OX2/CYP85A2 medium borderline
BnigB6G0032590.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0002110.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0010100.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0010910.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0015060.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0025660.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0025880.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0025930.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0035760.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0035770.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0039650.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0052420.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB7G0054760.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0001520.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0004520.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0009990.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0016150.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0022570.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0028270.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0031070.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0031080.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0032480.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0039260.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0043920.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0050900.1 Steroid BR6OX2/CYP85A2 low borderline
BnigB8G0054570.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_11.20008330.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_118.10009310.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_171.10017930.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_215.10022650.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_247.10024890.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_28.10028100.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_312.10035160.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_44.20047460.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_678.10060640.1 Steroid BR6OX2/CYP85A2 low borderline
Bnigscaffold_809.10064320.1 Steroid BR6OX2/CYP85A2 low borderline