PlantSME Plant secondary metabolism enzyme database

Brassica nigra (brassica_nigra)

Imported from atlas release summary for Brassica nigra.

2043
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 641 19 BAHD (288) View species results
Phenylpropanoid pathway 428 12 POD (188) View species results
Alkaloid pathway 409 20 7DLGT (76) View species results
Flavonoid pathway 260 12 UFGT (169) View species results
Rosmarinic acid pathway 180 7 C4H (80) View species results
Steroid pathway 125 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2026 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
BnigB1G0010570.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0010590.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0010600.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0010610.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0010620.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0015820.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0015940.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0017630.1 Steroid DWF4/CYP90B1 medium borderline
BnigB1G0018050.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0021650.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0024960.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0028810.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0034520.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0034530.1 Steroid DWF4/CYP90B1 low borderline
BnigB1G0040950.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0001540.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0014810.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0015580.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0018910.1 Steroid DWF4/CYP90B1 medium borderline
BnigB2G0020000.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0022500.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0026470.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0028790.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0033420.1 Steroid DWF4/CYP90B1 medium borderline
BnigB2G0035950.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0036760.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0050250.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055480.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055490.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055510.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055540.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055560.1 Steroid DWF4/CYP90B1 low borderline
BnigB2G0055960.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0005490.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0009270.1 Steroid DWF4/CYP90B1 medium borderline
BnigB3G0027210.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0038550.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0040090.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0042870.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0042880.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0054070.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0054400.1 Steroid DWF4/CYP90B1 medium borderline
BnigB4G0004500.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0014220.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0014250.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0016510.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0018750.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0037370.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009300.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009310.1 Steroid DWF4/CYP90B1 low borderline