PlantSME Plant secondary metabolism enzyme database

Brassica nigra (brassica_nigra)

Imported from atlas release summary for Brassica nigra.

2043
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 641 19 BAHD (288) View species results
Phenylpropanoid pathway 428 12 POD (188) View species results
Alkaloid pathway 409 20 7DLGT (76) View species results
Flavonoid pathway 260 12 UFGT (169) View species results
Rosmarinic acid pathway 180 7 C4H (80) View species results
Steroid pathway 125 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2026 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
BnigB5G0009340.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009350.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009360.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009370.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0014850.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0020020.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0021760.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0027890.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0028330.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0037580.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0045700.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0048280.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0050160.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0050170.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0050180.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0011920.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0016720.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0017030.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0018660.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032790.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032820.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032830.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032840.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032850.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032860.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032870.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033810.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033820.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033830.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0034230.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0035470.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0035990.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0036120.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0038520.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0015070.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0015950.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0028150.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0028560.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0028580.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0046460.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0053740.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0053750.1 Steroid DWF4/CYP90B1 low borderline
BnigB7G0053770.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0001510.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0001580.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0001590.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0001600.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0008960.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0009350.1 Steroid DWF4/CYP90B1 low borderline
BnigB8G0011060.1 Steroid DWF4/CYP90B1 low borderline