PlantSME Plant secondary metabolism enzyme database

Citrus clementina (citrus_clementina)

Imported from atlas release summary for Citrus clementina.

2385
Candidate Protein Records
1991
Pathway-Level Records
4984
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 543 19 BAHD (230) View species results
Alkaloid pathway 494 23 7DLGT (91) View species results
Phenylpropanoid pathway 395 11 POD (123) View species results
Flavonoid pathway 251 9 UFGT (153) View species results
Rosmarinic acid pathway 190 7 C4H (77) View species results
Steroid pathway 118 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 346 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cclescaffold_70200410.1 Phenylpropanoid LAC medium pass
Cclescaffold_80217980.1 Phenylpropanoid LAC medium pass
Cclescaffold_80218250.1 Phenylpropanoid LAC medium pass
Cclescaffold_80219430.1 Phenylpropanoid LAC medium pass
Cclescaffold_80220500.1 Phenylpropanoid LAC medium pass
Cclescaffold_80221530.1 Phenylpropanoid LAC medium pass
Cclescaffold_3790102780.1 Phenylpropanoid PAL high pass
Cclescaffold_40109260.1 Phenylpropanoid PAL high pass
Cclescaffold_60161300.1 Phenylpropanoid PAL high pass
Cclescaffold_60161310.1 Phenylpropanoid PAL high pass
Cclescaffold_80204150.1 Phenylpropanoid PAL low borderline
Cclescaffold_80216940.1 Phenylpropanoid PAL medium pass
Cclescaffold_80216960.1 Phenylpropanoid PAL high pass
Cclescaffold_80216980.1 Phenylpropanoid PAL high pass
Cclescaffold_10001060.1 Phenylpropanoid POD medium pass
Cclescaffold_10001260.1 Phenylpropanoid POD medium pass
Cclescaffold_10002040.1 Phenylpropanoid POD medium pass
Cclescaffold_10002040.2 Phenylpropanoid POD medium pass
Cclescaffold_10002280.1 Phenylpropanoid POD medium pass
Cclescaffold_10002600.1 Phenylpropanoid POD medium pass
Cclescaffold_10005700.1 Phenylpropanoid POD medium pass
Cclescaffold_10007470.1 Phenylpropanoid POD medium pass
Cclescaffold_10007470.2 Phenylpropanoid POD medium pass
Cclescaffold_10015060.1 Phenylpropanoid POD medium pass
Cclescaffold_10015060.2 Phenylpropanoid POD medium pass
Cclescaffold_10015060.3 Phenylpropanoid POD medium pass
Cclescaffold_10018790.1 Phenylpropanoid POD medium pass
Cclescaffold_10020370.1 Phenylpropanoid POD medium pass
Cclescaffold_10021850.1 Phenylpropanoid POD medium pass
Cclescaffold_20028200.1 Phenylpropanoid POD medium pass
Cclescaffold_20028210.1 Phenylpropanoid POD medium pass
Cclescaffold_20028230.1 Phenylpropanoid POD medium pass
Cclescaffold_20028240.1 Phenylpropanoid POD medium pass
Cclescaffold_20028260.1 Phenylpropanoid POD medium pass
Cclescaffold_20031950.1 Phenylpropanoid POD medium pass
Cclescaffold_20032200.1 Phenylpropanoid POD medium pass
Cclescaffold_20035190.1 Phenylpropanoid POD medium pass
Cclescaffold_20036820.1 Phenylpropanoid POD medium pass
Cclescaffold_20040030.1 Phenylpropanoid POD medium pass
Cclescaffold_20040040.1 Phenylpropanoid POD medium pass
Cclescaffold_20041020.1 Phenylpropanoid POD medium pass
Cclescaffold_20041020.2 Phenylpropanoid POD medium pass
Cclescaffold_20041020.3 Phenylpropanoid POD medium pass
Cclescaffold_20044280.1 Phenylpropanoid POD medium pass
Cclescaffold_20044290.1 Phenylpropanoid POD medium pass
Cclescaffold_20044290.2 Phenylpropanoid POD medium pass
Cclescaffold_20047710.1 Phenylpropanoid POD medium pass
Cclescaffold_20048900.1 Phenylpropanoid POD medium pass
Cclescaffold_20048920.1 Phenylpropanoid POD medium pass
Cclescaffold_20053710.1 Phenylpropanoid POD medium pass