PlantSME Plant secondary metabolism enzyme database

Citrus clementina (citrus_clementina)

Imported from atlas release summary for Citrus clementina.

2385
Candidate Protein Records
1991
Pathway-Level Records
4984
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 543 19 BAHD (230) View species results
Alkaloid pathway 494 23 7DLGT (91) View species results
Phenylpropanoid pathway 395 11 POD (123) View species results
Flavonoid pathway 251 9 UFGT (153) View species results
Rosmarinic acid pathway 190 7 C4H (77) View species results
Steroid pathway 118 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 346 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cclescaffold_60167950.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_60173790.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_60177390.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70197180.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70198860.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70199550.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70199810.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70199830.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70199840.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70199850.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_70200130.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_80215210.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_80220190.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_80220630.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90231410.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90236180.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90237710.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90238900.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90238910.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90238940.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90240960.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90240990.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_90241340.1 Steroid BR6OX2/CYP85A2 low borderline
Cclescaffold_100024680.1 Steroid CAS medium pass
Cclescaffold_10020820.1 Steroid CAS medium pass
Cclescaffold_10020820.2 Steroid CAS medium pass
Cclescaffold_10020860.1 Steroid CAS medium pass
Cclescaffold_10020890.1 Steroid CAS medium pass
Cclescaffold_20037630.1 Steroid CAS medium pass
Cclescaffold_20039710.1 Steroid CAS medium pass
Cclescaffold_20051600.1 Steroid CAS low borderline
Cclescaffold_20051630.1 Steroid CAS low borderline
Cclescaffold_20051640.1 Steroid CAS medium pass
Cclescaffold_20051640.2 Steroid CAS medium pass
Cclescaffold_20052510.1 Steroid CAS medium pass
Cclescaffold_30069540.1 Steroid CAS low borderline
Cclescaffold_30070660.1 Steroid CAS medium pass
Cclescaffold_30079320.1 Steroid CAS medium pass
Cclescaffold_30079320.2 Steroid CAS medium pass
Cclescaffold_30079320.3 Steroid CAS medium pass
Cclescaffold_30093170.1 Steroid CAS medium pass
Cclescaffold_30099480.1 Steroid CAS medium pass
Cclescaffold_40108830.1 Steroid CAS medium pass
Cclescaffold_40108840.1 Steroid CAS medium pass
Cclescaffold_40108860.1 Steroid CAS medium pass
Cclescaffold_40108870.1 Steroid CAS medium pass
Cclescaffold_40108880.1 Steroid CAS medium pass
Cclescaffold_40108890.1 Steroid CAS medium pass
Cclescaffold_40115110.1 Steroid CAS medium pass
Cclescaffold_40115120.1 Steroid CAS medium pass