PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

877
Candidate Protein Records
648
Pathway-Level Records
1636
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
CLame669180235510 Steroid DWF4/CYP90B1 low borderline
CLame660780082790 Steroid DWF5 medium pass
CLame661760092250 Steroid DWF5 medium pass
CLame665710148450 Steroid DWF5 high pass
CLame666590167140 Steroid DWF5 medium pass
CLame666950175250 Steroid DWF5 medium pass
CLame662200097830 Steroid DWF7 medium pass
CLame659120068330 Steroid FK high pass
CLame647050025010 Steroid HYD1 high pass
CLame617000014490 Steroid ROT3/CYP90C1 low borderline
CLame667630194730 Steroid ROT3/CYP90C1 medium borderline
CLame668500221090 Steroid ROT3/CYP90C1 low borderline
CLame665930153250 Steroid SMO1/SMO2 medium pass
CLame670240239110 Steroid SMO1/SMO2 medium pass
CLame670630240410 Steroid SMO1/SMO2 low borderline
CLame476920001490 Steroid SMT1/SMT2/SMT3 low borderline
CLame542080007280 Steroid SMT1/SMT2/SMT3 low borderline
CLame646800024520 Steroid SMT1/SMT2/SMT3 low borderline
CLame650320030680 Steroid SMT1/SMT2/SMT3 low borderline
CLame654640042920 Steroid SMT1/SMT2/SMT3 low borderline
CLame657740059090 Steroid SMT1/SMT2/SMT3 low borderline
CLame660240078130 Steroid SMT1/SMT2/SMT3 low borderline
CLame661040085740 Steroid SMT1/SMT2/SMT3 low borderline
CLame662540101370 Steroid SMT1/SMT2/SMT3 medium pass
CLame663350111890 Steroid SMT1/SMT2/SMT3 medium pass
CLame664200121980 Steroid SMT1/SMT2/SMT3 medium pass
CLame666620167770 Steroid SMT1/SMT2/SMT3 low borderline
CLame666780171410 Steroid SMT1/SMT2/SMT3 low borderline
CLame667020177380 Steroid SMT1/SMT2/SMT3 low borderline
CLame667260184390 Steroid SMT1/SMT2/SMT3 low borderline
CLame668080207590 Steroid SMT1/SMT2/SMT3 low borderline
CLame668280213520 Steroid SMT1/SMT2/SMT3 low borderline
CLame668370216460 Steroid SMT1/SMT2/SMT3 medium pass
CLame669060234250 Steroid SMT1/SMT2/SMT3 low borderline
CLame669620237660 Steroid SMT1/SMT2/SMT3 low borderline
CLame636630018420 Steroid SQE low borderline
CLame667730197690 Steroid SQE medium pass
CLame668920230870 Steroid SQE low borderline
CLame541910007190 Steroid SQS/FDFT1 medium pass
CLame650210030310 Steroid SQS/FDFT1 high pass
CLame656010049660 Steroid SQS/FDFT1 high pass
CLame666140157130 Steroid SQS/FDFT1 high pass
CLame666900174030 Steroid SQS/FDFT1 low borderline
CLame667680196010 Steroid SQS/FDFT1 low borderline
CLame667900203180 Steroid SQS/FDFT1 medium pass
CLame608580012420 Terpenoid AACT medium borderline
CLame659890074910 Terpenoid AACT medium borderline
CLame665070136310 Terpenoid AACT medium borderline
CLame668280213420 Terpenoid AACT low borderline
CLame668290214250 Terpenoid AACT medium borderline