PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

648
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
CLame480070002690 Steroid DWF4/CYP90B1 low borderline
CLame542720007420 Steroid DWF4/CYP90B1 low borderline
CLame618190014820 Steroid DWF4/CYP90B1 low borderline
CLame635880017740 Steroid DWF4/CYP90B1 medium borderline
CLame651650033530 Steroid DWF4/CYP90B1 low borderline
CLame654100040570 Steroid DWF4/CYP90B1 low borderline
CLame661400088570 Steroid DWF4/CYP90B1 medium borderline
CLame661600090380 Steroid DWF4/CYP90B1 low borderline
CLame662790104530 Steroid DWF4/CYP90B1 low borderline
CLame664610127640 Steroid DWF4/CYP90B1 low borderline
CLame664790130410 Steroid DWF4/CYP90B1 low borderline
CLame665490145190 Steroid DWF4/CYP90B1 low borderline
CLame665600147380 Steroid DWF4/CYP90B1 low borderline
CLame665600147410 Steroid DWF4/CYP90B1 low borderline
CLame666030155380 Steroid DWF4/CYP90B1 low borderline
CLame666330161280 Steroid DWF4/CYP90B1 low borderline
CLame666330161300 Steroid DWF4/CYP90B1 low borderline
CLame666330161340 Steroid DWF4/CYP90B1 low borderline
CLame666430164060 Steroid DWF4/CYP90B1 low borderline
CLame667040178430 Steroid DWF4/CYP90B1 low borderline
CLame667450189310 Steroid DWF4/CYP90B1 low borderline
CLame667550192540 Steroid DWF4/CYP90B1 low borderline
CLame667550192560 Steroid DWF4/CYP90B1 low borderline
CLame667750198640 Steroid DWF4/CYP90B1 medium borderline
CLame667750198670 Steroid DWF4/CYP90B1 low borderline
CLame667830200970 Steroid DWF4/CYP90B1 medium borderline
CLame667830201000 Steroid DWF4/CYP90B1 medium borderline
CLame667920203800 Steroid DWF4/CYP90B1 medium borderline
CLame667990205470 Steroid DWF4/CYP90B1 low borderline
CLame668110207810 Steroid DWF4/CYP90B1 low borderline
CLame669180235510 Steroid DWF4/CYP90B1 low borderline