PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

648
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
CLame635880017760 Steroid BR6OX2/CYP85A2 low borderline
CLame640490019190 Steroid BR6OX2/CYP85A2 low borderline
CLame654160040860 Steroid BR6OX2/CYP85A2 medium borderline
CLame655200046040 Steroid BR6OX2/CYP85A2 low borderline
CLame656330051260 Steroid BR6OX2/CYP85A2 low borderline
CLame656640052160 Steroid BR6OX2/CYP85A2 low borderline
CLame658110061190 Steroid BR6OX2/CYP85A2 medium borderline
CLame658110061250 Steroid BR6OX2/CYP85A2 low borderline
CLame658330063090 Steroid BR6OX2/CYP85A2 low borderline
CLame658830066340 Steroid BR6OX2/CYP85A2 low borderline
CLame659810074340 Steroid BR6OX2/CYP85A2 low borderline
CLame660090077100 Steroid BR6OX2/CYP85A2 low borderline
CLame660150077420 Steroid BR6OX2/CYP85A2 low borderline
CLame662800104610 Steroid BR6OX2/CYP85A2 low borderline
CLame662800104660 Steroid BR6OX2/CYP85A2 low borderline
CLame663290111050 Steroid BR6OX2/CYP85A2 low borderline
CLame664140121290 Steroid BR6OX2/CYP85A2 low borderline
CLame664750129670 Steroid BR6OX2/CYP85A2 low borderline
CLame664860132530 Steroid BR6OX2/CYP85A2 low borderline
CLame664860132540 Steroid BR6OX2/CYP85A2 low borderline
CLame665010135670 Steroid BR6OX2/CYP85A2 low borderline
CLame665170138640 Steroid BR6OX2/CYP85A2 low borderline
CLame665230139880 Steroid BR6OX2/CYP85A2 low borderline
CLame665230139890 Steroid BR6OX2/CYP85A2 low borderline
CLame665930153210 Steroid BR6OX2/CYP85A2 low borderline
CLame666410163430 Steroid BR6OX2/CYP85A2 low borderline
CLame667070178780 Steroid BR6OX2/CYP85A2 low borderline
CLame667510190550 Steroid BR6OX2/CYP85A2 low borderline
CLame667830200960 Steroid BR6OX2/CYP85A2 low borderline
CLame667990205480 Steroid BR6OX2/CYP85A2 low borderline
CLame668120208660 Steroid BR6OX2/CYP85A2 low borderline
CLame668620224760 Steroid BR6OX2/CYP85A2 low borderline
CLame669030233770 Steroid BR6OX2/CYP85A2 low borderline
CLame669080234670 Steroid BR6OX2/CYP85A2 low borderline
CLame669180235460 Steroid BR6OX2/CYP85A2 low borderline
CLame670450239570 Steroid BR6OX2/CYP85A2 low borderline