PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva1820280560 Alkaloid NMT low borderline
HvarHygva19760294990 Alkaloid NMT medium borderline
HvarHygva20550302690 Alkaloid NMT medium pass
HvarHygva22020315260 Alkaloid NMT low borderline
HvarHygva22620319000 Alkaloid NMT low borderline
HvarHygva23280325820 Alkaloid NMT medium pass
HvarHygva23280325830 Alkaloid NMT medium pass
HvarHygva2360329400 Alkaloid NMT low borderline
HvarHygva23930332240 Alkaloid NMT medium borderline
HvarHygva24840341360 Alkaloid NMT low borderline
HvarHygva25320345880 Alkaloid NMT low borderline
HvarHygva25580348310 Alkaloid NMT low borderline
HvarHygva25850351370 Alkaloid NMT medium borderline
HvarHygva26410357040 Alkaloid NMT medium pass
HvarHygva27150364360 Alkaloid NMT medium borderline
HvarHygva27360366320 Alkaloid NMT low borderline
HvarHygva29460385500 Alkaloid NMT medium pass
HvarHygva30520395950 Alkaloid NMT medium pass
HvarHygva30990401070 Alkaloid NMT low borderline
HvarHygva31230405170 Alkaloid NMT medium pass
HvarHygva3830412340 Alkaloid NMT medium pass
HvarHygva4460418590 Alkaloid NMT medium pass
HvarHygva490422980 Alkaloid NMT medium borderline
HvarHygva4960423510 Alkaloid NMT medium pass
HvarHygva510425010 Alkaloid NMT medium pass
HvarHygva5570429990 Alkaloid NMT medium pass
HvarHygva5750432190 Alkaloid NMT medium pass
HvarHygva5860433260 Alkaloid NMT medium pass
HvarHygva640438830 Alkaloid NMT medium pass
HvarHygva640438850 Alkaloid NMT medium pass
HvarHygva8830462550 Alkaloid NMT medium pass
HvarHygva9000464540 Alkaloid NMT low borderline
HvarHygva9130465700 Alkaloid NMT medium pass
HvarHygva9380468170 Alkaloid NMT medium borderline
HvarHygva9390468320 Alkaloid NMT medium pass
HvarHygva9620471140 Alkaloid NMT medium pass
HvarHygva9880473380 Alkaloid NMT low borderline
HvarHygva9920473790 Alkaloid NMT medium borderline
HvarHygva10060000610 Alkaloid PMT low borderline
HvarHygva11480013600 Alkaloid PMT low borderline
HvarHygva11480013640 Alkaloid PMT low borderline
HvarHygva1280028120 Alkaloid PMT medium borderline
HvarHygva1464360052780 Alkaloid PMT medium pass
HvarHygva15230069750 Alkaloid PMT low borderline
HvarHygva1561590112050 Alkaloid PMT medium pass
HvarHygva1565530122130 Alkaloid PMT medium pass
HvarHygva1581750177650 Alkaloid PMT medium borderline
HvarHygva7610450620 Alkaloid PMT medium pass
HvarHygva1050005200 Alkaloid PYKS low borderline
HvarHygva10740007200 Alkaloid PYKS high pass