PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva1719530231540 Rosmarinic Acid 4CL low borderline
HvarHygva17310239240 Rosmarinic Acid 4CL medium pass
HvarHygva17570257930 Rosmarinic Acid 4CL medium pass
HvarHygva1770640270550 Rosmarinic Acid 4CL low borderline
HvarHygva1770650270590 Rosmarinic Acid 4CL low borderline
HvarHygva19550292640 Rosmarinic Acid 4CL medium pass
HvarHygva20260299460 Rosmarinic Acid 4CL low borderline
HvarHygva20680303710 Rosmarinic Acid 4CL low borderline
HvarHygva23650330060 Rosmarinic Acid 4CL medium pass
HvarHygva26210354620 Rosmarinic Acid 4CL low borderline
HvarHygva26410356960 Rosmarinic Acid 4CL medium pass
HvarHygva27120363810 Rosmarinic Acid 4CL medium pass
HvarHygva27380366410 Rosmarinic Acid 4CL low borderline
HvarHygva27710369890 Rosmarinic Acid 4CL low borderline
HvarHygva27970371920 Rosmarinic Acid 4CL medium pass
HvarHygva280372480 Rosmarinic Acid 4CL medium pass
HvarHygva28880379760 Rosmarinic Acid 4CL low borderline
HvarHygva30110391980 Rosmarinic Acid 4CL low borderline
HvarHygva30460395140 Rosmarinic Acid 4CL low borderline
HvarHygva3720411260 Rosmarinic Acid 4CL medium pass
HvarHygva5480428920 Rosmarinic Acid 4CL low borderline
HvarHygva660441010 Rosmarinic Acid 4CL medium pass
HvarHygva7000445400 Rosmarinic Acid 4CL low borderline
HvarHygva7710451720 Rosmarinic Acid 4CL medium pass
HvarHygva7710451730 Rosmarinic Acid 4CL medium pass
HvarHygva8260456730 Rosmarinic Acid 4CL low borderline
HvarHygva8720461400 Rosmarinic Acid 4CL low borderline
HvarHygva950469510 Rosmarinic Acid 4CL low borderline
HvarHygva10350003670 Rosmarinic Acid C4H low borderline
HvarHygva10480005050 Rosmarinic Acid C4H medium pass
HvarHygva1080007490 Rosmarinic Acid C4H low borderline
HvarHygva12460023810 Rosmarinic Acid C4H low borderline
HvarHygva12460023820 Rosmarinic Acid C4H low borderline
HvarHygva12460023870 Rosmarinic Acid C4H medium pass
HvarHygva12830028770 Rosmarinic Acid C4H low borderline
HvarHygva1355150035150 Rosmarinic Acid C4H low borderline
HvarHygva1370037080 Rosmarinic Acid C4H medium pass
HvarHygva1370037270 Rosmarinic Acid C4H low borderline
HvarHygva14070043120 Rosmarinic Acid C4H low borderline
HvarHygva14070043130 Rosmarinic Acid C4H low borderline
HvarHygva1440048790 Rosmarinic Acid C4H low borderline
HvarHygva14610052200 Rosmarinic Acid C4H low borderline
HvarHygva1470053540 Rosmarinic Acid C4H low borderline
HvarHygva1470053550 Rosmarinic Acid C4H low borderline
HvarHygva1476400055700 Rosmarinic Acid C4H medium pass
HvarHygva1477530056100 Rosmarinic Acid C4H low borderline
HvarHygva1489850058440 Rosmarinic Acid C4H low borderline
HvarHygva1490058520 Rosmarinic Acid C4H low borderline
HvarHygva1490058530 Rosmarinic Acid C4H medium pass
HvarHygva1491480058820 Rosmarinic Acid C4H low borderline