PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva4750421540 Rosmarinic Acid PAL high pass
HvarHygva860460580 Rosmarinic Acid PAL high pass
HvarHygva860460590 Rosmarinic Acid PAL high pass
HvarHygva9690471600 Rosmarinic Acid PAL high pass
HvarHygva10060000610 Rosmarinic Acid RAS medium pass
HvarHygva10920008870 Rosmarinic Acid RAS medium pass
HvarHygva11480013600 Rosmarinic Acid RAS medium pass
HvarHygva15230069750 Rosmarinic Acid RAS medium pass
HvarHygva1528170071860 Rosmarinic Acid RAS low borderline
HvarHygva1539910079370 Rosmarinic Acid RAS low borderline
HvarHygva1561590112040 Rosmarinic Acid RAS low borderline
HvarHygva15630115210 Rosmarinic Acid RAS medium pass
HvarHygva1573590150860 Rosmarinic Acid RAS low borderline
HvarHygva1587240197280 Rosmarinic Acid RAS low borderline
HvarHygva1760050260530 Rosmarinic Acid RAS medium pass
HvarHygva1760060260630 Rosmarinic Acid RAS medium pass
HvarHygva22030315400 Rosmarinic Acid RAS medium pass
HvarHygva23060323870 Rosmarinic Acid RAS medium pass
HvarHygva23060323890 Rosmarinic Acid RAS low borderline
HvarHygva25320345910 Rosmarinic Acid RAS low borderline
HvarHygva26500357930 Rosmarinic Acid RAS low borderline
HvarHygva14300046400 Rosmarinic Acid TAT low borderline
HvarHygva1548320089040 Rosmarinic Acid TAT medium pass
HvarHygva1559780107070 Rosmarinic Acid TAT medium pass
HvarHygva1585690191040 Rosmarinic Acid TAT medium pass
HvarHygva1736360242540 Rosmarinic Acid TAT medium pass
HvarHygva1736370242580 Rosmarinic Acid TAT medium pass
HvarHygva26620359180 Rosmarinic Acid TAT medium pass
HvarHygva350409190 Rosmarinic Acid TAT medium pass
HvarHygva1470053540 Steroid BR6OX1/CYP85A1 low borderline
HvarHygva1533520075010 Steroid BR6OX1/CYP85A1 medium borderline
HvarHygva1584660187400 Steroid BR6OX1/CYP85A1 low borderline
HvarHygva21320309240 Steroid BR6OX1/CYP85A1 medium borderline
HvarHygva2260318860 Steroid BR6OX1/CYP85A1 low borderline
HvarHygva29950390070 Steroid BR6OX1/CYP85A1 medium borderline
HvarHygva580432570 Steroid BR6OX1/CYP85A1 low borderline
HvarHygva10480005050 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva12460023870 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1355150035150 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1491480058820 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1531820074330 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1533460075000 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1556810102140 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1560760109370 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva15610110050 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1567890130970 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1569630136140 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1570230138440 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva15710140820 Steroid BR6OX2/CYP85A2 low borderline
HvarHygva1571850143890 Steroid BR6OX2/CYP85A2 low borderline