PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva17120225350 Steroid DWF4/CYP90B1 low borderline
HvarHygva17930278670 Steroid DWF4/CYP90B1 low borderline
HvarHygva18970287470 Steroid DWF4/CYP90B1 low borderline
HvarHygva20000297350 Steroid DWF4/CYP90B1 low borderline
HvarHygva20000297360 Steroid DWF4/CYP90B1 low borderline
HvarHygva21290308890 Steroid DWF4/CYP90B1 low borderline
HvarHygva2130309000 Steroid DWF4/CYP90B1 low borderline
HvarHygva22090315790 Steroid DWF4/CYP90B1 medium borderline
HvarHygva22260316960 Steroid DWF4/CYP90B1 low borderline
HvarHygva24260335140 Steroid DWF4/CYP90B1 low borderline
HvarHygva24380336150 Steroid DWF4/CYP90B1 low borderline
HvarHygva26630359330 Steroid DWF4/CYP90B1 low borderline
HvarHygva27380366480 Steroid DWF4/CYP90B1 low borderline
HvarHygva28430376460 Steroid DWF4/CYP90B1 low borderline
HvarHygva29250383170 Steroid DWF4/CYP90B1 low borderline
HvarHygva30320393520 Steroid DWF4/CYP90B1 low borderline
HvarHygva3790412010 Steroid DWF4/CYP90B1 medium borderline
HvarHygva3800412190 Steroid DWF4/CYP90B1 low borderline
HvarHygva5160425450 Steroid DWF4/CYP90B1 low borderline
HvarHygva8280457000 Steroid DWF4/CYP90B1 medium borderline
HvarHygva8330457560 Steroid DWF4/CYP90B1 low borderline
HvarHygva8410458610 Steroid DWF4/CYP90B1 low borderline
HvarHygva9260466820 Steroid DWF4/CYP90B1 low borderline
HvarHygva9260466830 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1580170172040 Steroid DWF5 medium pass
HvarHygva1663160218550 Steroid DWF5 medium pass
HvarHygva1663170218580 Steroid DWF5 medium pass
HvarHygva17970278910 Steroid DWF5 medium borderline
HvarHygva18070279510 Steroid DWF5 medium borderline
HvarHygva18070279520 Steroid DWF5 medium pass
HvarHygva21710312500 Steroid DWF5 medium pass
HvarHygva23330326690 Steroid DWF5 medium borderline
HvarHygva28050373310 Steroid DWF5 high pass
HvarHygva28520377060 Steroid DWF5 medium pass
HvarHygva1255780025140 Steroid DWF7 medium pass
HvarHygva1558140104670 Steroid DWF7 medium pass
HvarHygva1569090134530 Steroid FK high pass
HvarHygva3240406300 Steroid FK high pass
HvarHygva10980009380 Steroid HYD1 high pass
HvarHygva1424560045050 Steroid HYD1 low borderline
HvarHygva930467230 Steroid HYD1 high pass
HvarHygva1563960117870 Steroid ROT3/CYP90C1 medium borderline
HvarHygva1582470179900 Steroid ROT3/CYP90C1 medium borderline
HvarHygva1770620270460 Steroid ROT3/CYP90C1 low borderline
HvarHygva1770630270520 Steroid ROT3/CYP90C1 low borderline
HvarHygva21050306660 Steroid ROT3/CYP90C1 low borderline
HvarHygva23950332330 Steroid ROT3/CYP90C1 medium borderline
HvarHygva5480428980 Steroid ROT3/CYP90C1 low borderline
HvarHygva5650430830 Steroid ROT3/CYP90C1 medium borderline
HvarHygva570431340 Steroid ROT3/CYP90C1 medium borderline