PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
HvarHygva1569430135430 Alkaloid CYP719 low borderline
HvarHygva1731720239700 Alkaloid CYP719 medium borderline
HvarHygva1769390269390 Alkaloid CYP719 medium borderline
HvarHygva1769400269470 Alkaloid CYP719 medium borderline
HvarHygva19730294750 Alkaloid CYP719 low borderline
HvarHygva12460023820 Alkaloid CYP80B1 medium borderline
HvarHygva1470053540 Alkaloid CYP80B1 medium borderline
HvarHygva1545090085440 Alkaloid CYP80B1 medium borderline
HvarHygva1564080118600 Alkaloid CYP80B1 low borderline
HvarHygva15920208600 Alkaloid CYP80B1 medium borderline
HvarHygva20000297350 Alkaloid CYP80B1 medium borderline
HvarHygva2130309000 Alkaloid CYP80B1 medium borderline
HvarHygva27290365820 Alkaloid CYP80B1 medium borderline
HvarHygva5650430830 Alkaloid CYP80B1 medium borderline
HvarHygva8410458610 Alkaloid CYP80B1 medium borderline
HvarHygva1572120145120 Alkaloid CYP80F1 low borderline
HvarHygva12460023810 Alkaloid G8O/G8H medium borderline
HvarHygva14070043130 Alkaloid G8O/G8H low borderline
HvarHygva1533460074990 Alkaloid G8O/G8H medium borderline
HvarHygva1554560097840 Alkaloid G8O/G8H medium borderline
HvarHygva1564080118590 Alkaloid G8O/G8H low borderline
HvarHygva1569440135530 Alkaloid G8O/G8H medium borderline
HvarHygva1571850143890 Alkaloid G8O/G8H medium borderline
HvarHygva1585220189440 Alkaloid G8O/G8H medium borderline
HvarHygva18970287470 Alkaloid G8O/G8H medium borderline
HvarHygva23750330730 Alkaloid G8O/G8H medium borderline
HvarHygva2590351720 Alkaloid G8O/G8H medium borderline
HvarHygva2590351730 Alkaloid G8O/G8H medium borderline
HvarHygva26580358870 Alkaloid G8O/G8H medium borderline
HvarHygva3810412280 Alkaloid G8O/G8H medium borderline
HvarHygva5650430820 Alkaloid G8O/G8H medium borderline
HvarHygva580432570 Alkaloid G8O/G8H medium borderline
HvarHygva8410458620 Alkaloid G8O/G8H low borderline
HvarHygva1569350135200 Alkaloid GES medium borderline
HvarHygva19760294880 Alkaloid GES low borderline
HvarHygva19760294910 Alkaloid GES low borderline
HvarHygva19760294920 Alkaloid GES low borderline
HvarHygva22510318400 Alkaloid GES low borderline
HvarHygva2480340880 Alkaloid GES low borderline
HvarHygva25850351300 Alkaloid GES low borderline
HvarHygva26210354650 Alkaloid GES medium pass
HvarHygva27710369860 Alkaloid GES medium pass
HvarHygva29330383930 Alkaloid GES low borderline
HvarHygva29730388060 Alkaloid GES low borderline
HvarHygva8230456300 Alkaloid GES low borderline
HvarHygva10080000840 Alkaloid GS low borderline
HvarHygva10240002710 Alkaloid GS low borderline
HvarHygva1100009640 Alkaloid GS medium pass
HvarHygva11270011670 Alkaloid GS low borderline
HvarHygva11270011680 Alkaloid GS medium pass