PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva14070043120 Alkaloid IO medium borderline
HvarHygva1470053550 Alkaloid IO medium borderline
HvarHygva1477530056100 Alkaloid IO medium borderline
HvarHygva1533460075000 Alkaloid IO medium borderline
HvarHygva15420081220 Alkaloid IO medium borderline
HvarHygva1556650101840 Alkaloid IO low borderline
HvarHygva15610110050 Alkaloid IO medium borderline
HvarHygva1568570133340 Alkaloid IO medium borderline
HvarHygva1568700133730 Alkaloid IO low borderline
HvarHygva1573790151530 Alkaloid IO medium borderline
HvarHygva1580500173260 Alkaloid IO low borderline
HvarHygva1584660187400 Alkaloid IO medium borderline
HvarHygva1586820195150 Alkaloid IO medium borderline
HvarHygva1710224670 Alkaloid IO low borderline
HvarHygva17130226830 Alkaloid IO medium borderline
HvarHygva1731710239660 Alkaloid IO medium borderline
HvarHygva19700294320 Alkaloid IO low borderline
HvarHygva2020298890 Alkaloid IO medium borderline
HvarHygva20430301030 Alkaloid IO medium borderline
HvarHygva20860305070 Alkaloid IO medium borderline
HvarHygva24200334660 Alkaloid IO medium borderline
HvarHygva24380336160 Alkaloid IO medium borderline
HvarHygva24690339620 Alkaloid IO medium borderline
HvarHygva27510367590 Alkaloid IO medium borderline
HvarHygva28320375670 Alkaloid IO medium borderline
HvarHygva28430376460 Alkaloid IO medium borderline
HvarHygva29730388080 Alkaloid IO medium borderline
HvarHygva29950390070 Alkaloid IO medium borderline
HvarHygva31120403790 Alkaloid IO medium borderline
HvarHygva5460428810 Alkaloid IO medium borderline
HvarHygva8230456290 Alkaloid IO medium borderline
HvarHygva8330457560 Alkaloid IO medium borderline
HvarHygva1559180106310 Alkaloid ISY medium pass
HvarHygva1585890191850 Alkaloid ISY medium pass
HvarHygva16630218470 Alkaloid ISY medium pass
HvarHygva25810350700 Alkaloid ISY medium pass
HvarHygva11250011570 Alkaloid LAMT low borderline
HvarHygva1370037240 Alkaloid LAMT medium pass
HvarHygva14960060420 Alkaloid LAMT medium borderline
HvarHygva1550270091490 Alkaloid LAMT low borderline
HvarHygva1558880105610 Alkaloid LAMT medium borderline
HvarHygva19450291930 Alkaloid LAMT low borderline
HvarHygva21970314640 Alkaloid LAMT medium borderline
HvarHygva21980314830 Alkaloid LAMT medium borderline
HvarHygva23320326580 Alkaloid LAMT low borderline
HvarHygva25500347850 Alkaloid LAMT medium pass
HvarHygva31090402690 Alkaloid LAMT medium pass
HvarHygva3740411450 Alkaloid LAMT low borderline
HvarHygva390412910 Alkaloid LAMT medium pass
HvarHygva5420428550 Alkaloid LAMT low borderline