PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Iind00G0030350.1 Rosmarinic Acid C4H low borderline
Iind00G0030360.1 Rosmarinic Acid C4H low borderline
Iind00G0030400.1 Rosmarinic Acid C4H low borderline
Iind00G0030410.1 Rosmarinic Acid C4H low borderline
Iind00G0032180.1 Rosmarinic Acid C4H low borderline
Iind00G0032190.1 Rosmarinic Acid C4H low borderline
Iind01G0001130.1 Rosmarinic Acid C4H low borderline
Iind01G0003320.1 Rosmarinic Acid C4H medium pass
Iind01G0003540.1 Rosmarinic Acid C4H low borderline
Iind01G0004180.1 Rosmarinic Acid C4H low borderline
Iind01G0004190.1 Rosmarinic Acid C4H low borderline
Iind01G0004480.1 Rosmarinic Acid C4H low borderline
Iind01G0004690.1 Rosmarinic Acid C4H low borderline
Iind01G0005680.1 Rosmarinic Acid C4H low borderline
Iind01G0005690.1 Rosmarinic Acid C4H low borderline
Iind01G0008300.1 Rosmarinic Acid C4H medium pass
Iind01G0008990.1 Rosmarinic Acid C4H low borderline
Iind01G0012280.1 Rosmarinic Acid C4H low borderline
Iind01G0023310.1 Rosmarinic Acid C4H low borderline
Iind01G0023320.1 Rosmarinic Acid C4H low borderline
Iind01G0023370.1 Rosmarinic Acid C4H medium pass
Iind01G0028800.1 Rosmarinic Acid C4H low borderline
Iind01G0034070.1 Rosmarinic Acid C4H low borderline
Iind01G0034080.1 Rosmarinic Acid C4H medium pass
Iind01G0038520.1 Rosmarinic Acid C4H medium pass
Iind01G0038530.1 Rosmarinic Acid C4H medium pass
Iind01G0038540.1 Rosmarinic Acid C4H low borderline
Iind01G0038550.1 Rosmarinic Acid C4H medium pass
Iind01G0038560.1 Rosmarinic Acid C4H medium pass
Iind02G0000930.1 Rosmarinic Acid C4H low borderline
Iind02G0001020.1 Rosmarinic Acid C4H low borderline
Iind02G0003970.1 Rosmarinic Acid C4H low borderline
Iind02G0003970.2 Rosmarinic Acid C4H low borderline
Iind02G0003970.3 Rosmarinic Acid C4H low borderline
Iind02G0010240.1 Rosmarinic Acid C4H low borderline
Iind02G0010250.1 Rosmarinic Acid C4H low borderline
Iind02G0011580.1 Rosmarinic Acid C4H low borderline
Iind02G0011580.2 Rosmarinic Acid C4H low borderline
Iind02G0011580.3 Rosmarinic Acid C4H low borderline
Iind02G0011590.1 Rosmarinic Acid C4H low borderline
Iind02G0011600.1 Rosmarinic Acid C4H low borderline
Iind02G0011610.1 Rosmarinic Acid C4H low borderline
Iind02G0011620.1 Rosmarinic Acid C4H medium pass
Iind02G0011630.1 Rosmarinic Acid C4H low borderline
Iind02G0011660.1 Rosmarinic Acid C4H low borderline
Iind02G0012210.1 Rosmarinic Acid C4H medium pass
Iind02G0014730.1 Rosmarinic Acid C4H low borderline
Iind02G0017550.1 Rosmarinic Acid C4H low borderline
Iind02G0017550.2 Rosmarinic Acid C4H low borderline
Iind02G0017550.3 Rosmarinic Acid C4H low borderline