PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Iind04G0017790.1 Rosmarinic Acid C4H medium pass
Iind04G0017800.1 Rosmarinic Acid C4H medium pass
Iind04G0019160.1 Rosmarinic Acid C4H low borderline
Iind04G0019160.2 Rosmarinic Acid C4H low borderline
Iind04G0019160.3 Rosmarinic Acid C4H low borderline
Iind04G0022340.1 Rosmarinic Acid C4H low borderline
Iind04G0022930.1 Rosmarinic Acid C4H low borderline
Iind04G0024660.1 Rosmarinic Acid C4H low borderline
Iind04G0024660.2 Rosmarinic Acid C4H low borderline
Iind04G0025210.1 Rosmarinic Acid C4H low borderline
Iind04G0025530.1 Rosmarinic Acid C4H low borderline
Iind04G0029040.1 Rosmarinic Acid C4H low borderline
Iind04G0029100.1 Rosmarinic Acid C4H medium pass
Iind04G0031140.1 Rosmarinic Acid C4H low borderline
Iind05G0002100.1 Rosmarinic Acid C4H low borderline
Iind05G0011420.1 Rosmarinic Acid C4H low borderline
Iind05G0012530.1 Rosmarinic Acid C4H low borderline
Iind05G0012540.1 Rosmarinic Acid C4H medium pass
Iind05G0015170.1 Rosmarinic Acid C4H low borderline
Iind05G0015170.2 Rosmarinic Acid C4H low borderline
Iind05G0015450.1 Rosmarinic Acid C4H low borderline
Iind05G0015470.1 Rosmarinic Acid C4H low borderline
Iind05G0015490.1 Rosmarinic Acid C4H low borderline
Iind05G0020330.1 Rosmarinic Acid C4H low borderline
Iind05G0020330.3 Rosmarinic Acid C4H low borderline
Iind05G0021120.1 Rosmarinic Acid C4H medium pass
Iind05G0023450.1 Rosmarinic Acid C4H medium pass
Iind05G0023460.1 Rosmarinic Acid C4H medium pass
Iind05G0023470.1 Rosmarinic Acid C4H low borderline
Iind05G0031060.1 Rosmarinic Acid C4H low borderline
Iind05G0032920.1 Rosmarinic Acid C4H low borderline
Iind05G0033340.1 Rosmarinic Acid C4H low borderline
Iind05G0037420.1 Rosmarinic Acid C4H low borderline
Iind05G0037500.1 Rosmarinic Acid C4H low borderline
Iind05G0039430.1 Rosmarinic Acid C4H low borderline
Iind05G0040380.1 Rosmarinic Acid C4H low borderline
Iind06G0006090.1 Rosmarinic Acid C4H low borderline
Iind06G0006560.1 Rosmarinic Acid C4H low borderline
Iind06G0006960.1 Rosmarinic Acid C4H low borderline
Iind06G0007760.1 Rosmarinic Acid C4H low borderline
Iind06G0011930.1 Rosmarinic Acid C4H low borderline
Iind06G0012500.1 Rosmarinic Acid C4H low borderline
Iind06G0012500.2 Rosmarinic Acid C4H low borderline
Iind06G0017530.1 Rosmarinic Acid C4H low borderline
Iind06G0018250.1 Rosmarinic Acid C4H low borderline
Iind06G0024610.1 Rosmarinic Acid C4H low borderline
Iind06G0024620.1 Rosmarinic Acid C4H low borderline
Iind06G0024640.1 Rosmarinic Acid C4H medium pass
Iind06G0024660.1 Rosmarinic Acid C4H low borderline
Iind06G0024680.1 Rosmarinic Acid C4H low borderline