PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Iind04G0020900.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0011550.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0015960.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0015960.2 Alkaloid CODM/T6ODM medium borderline
Iind05G0016760.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0016760.2 Alkaloid CODM/T6ODM medium borderline
Iind05G0017340.2 Alkaloid CODM/T6ODM medium borderline
Iind05G0017350.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0021920.2 Alkaloid CODM/T6ODM medium borderline
Iind05G0023720.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0026590.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0026600.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0026670.1 Alkaloid CODM/T6ODM medium borderline
Iind05G0026790.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0000570.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0000580.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0002490.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0022800.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026280.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026290.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026290.2 Alkaloid CODM/T6ODM medium borderline
Iind06G0026290.3 Alkaloid CODM/T6ODM medium borderline
Iind06G0026290.4 Alkaloid CODM/T6ODM medium borderline
Iind06G0026300.1 Alkaloid CODM/T6ODM low borderline
Iind06G0026320.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026890.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026910.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0032810.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0037000.1 Alkaloid CODM/T6ODM medium borderline
IindContig001800002990.1 Alkaloid CODM/T6ODM medium borderline
IindContig008940014420.1 Alkaloid CODM/T6ODM medium borderline