PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Iind04G0002070.1 Steroid DWF4/CYP90B1 medium borderline
Iind04G0002070.2 Steroid DWF4/CYP90B1 medium borderline
Iind04G0002070.3 Steroid DWF4/CYP90B1 medium borderline
Iind04G0002080.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0002090.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0002130.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0002130.2 Steroid DWF4/CYP90B1 low borderline
Iind04G0005540.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0013700.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0019160.2 Steroid DWF4/CYP90B1 medium borderline
Iind04G0022340.1 Steroid DWF4/CYP90B1 low borderline
Iind04G0025530.1 Steroid DWF4/CYP90B1 low borderline
Iind05G0002100.1 Steroid DWF4/CYP90B1 low borderline
Iind05G0032920.1 Steroid DWF4/CYP90B1 low borderline
Iind05G0039430.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0011930.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0012500.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0012500.2 Steroid DWF4/CYP90B1 low borderline
Iind06G0017530.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0017530.3 Steroid DWF4/CYP90B1 low borderline
Iind06G0018250.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0024680.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0027390.5 Steroid DWF4/CYP90B1 medium borderline
Iind06G0027390.6 Steroid DWF4/CYP90B1 medium borderline
Iind06G0029890.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0030220.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0033600.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0037690.1 Steroid DWF4/CYP90B1 low borderline
IindContig000070000180.1 Steroid DWF4/CYP90B1 medium borderline
IindContig000300000600.1 Steroid DWF4/CYP90B1 medium borderline
IindContig006980008850.1 Steroid DWF4/CYP90B1 medium borderline
IindContig008560012970.1 Steroid DWF4/CYP90B1 medium borderline
IindContig008560012970.2 Steroid DWF4/CYP90B1 medium borderline
IindContig009420016200.1 Steroid DWF4/CYP90B1 low borderline
IindContig009420016240.1 Steroid DWF4/CYP90B1 medium borderline
IindContig009420016250.1 Steroid DWF4/CYP90B1 medium borderline
IindContig009710017190.1 Steroid DWF4/CYP90B1 low borderline
IindContig009750017380.1 Steroid DWF4/CYP90B1 medium borderline