PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Iind00G0004170.1 Flavonoid F3H medium borderline
Iind00G0004180.1 Flavonoid F3H medium borderline
Iind00G0004200.1 Flavonoid F3H medium borderline
Iind00G0004210.1 Flavonoid F3H medium borderline
Iind00G0004210.2 Flavonoid F3H medium borderline
Iind00G0004220.1 Flavonoid F3H medium borderline
Iind00G0004230.1 Flavonoid F3H medium borderline
Iind00G0005720.1 Flavonoid F3H medium pass
Iind00G0008590.1 Flavonoid F3H medium borderline
Iind00G0018550.1 Flavonoid F3H low borderline
Iind00G0019410.1 Flavonoid F3H low borderline
Iind00G0019410.2 Flavonoid F3H low borderline
Iind00G0025630.1 Flavonoid F3H medium borderline
Iind00G0025650.1 Flavonoid F3H medium borderline
Iind00G0025770.1 Flavonoid F3H medium borderline
Iind00G0025790.1 Flavonoid F3H medium borderline
Iind00G0033870.1 Flavonoid F3H medium borderline
Iind00G0035490.1 Flavonoid F3H medium borderline
Iind01G0002600.1 Flavonoid F3H medium borderline
Iind01G0002700.1 Flavonoid F3H medium borderline
Iind01G0004420.1 Flavonoid F3H medium borderline
Iind01G0006050.1 Flavonoid F3H medium borderline
Iind01G0006330.1 Flavonoid F3H medium borderline
Iind01G0007560.1 Flavonoid F3H medium borderline
Iind01G0010570.1 Flavonoid F3H medium borderline
Iind01G0018010.1 Flavonoid F3H medium borderline
Iind01G0018010.2 Flavonoid F3H medium borderline
Iind01G0020920.1 Flavonoid F3H medium borderline
Iind01G0020930.1 Flavonoid F3H medium borderline
Iind01G0029740.1 Flavonoid F3H medium borderline
Iind01G0030300.1 Flavonoid F3H low borderline
Iind01G0036650.1 Flavonoid F3H medium borderline
Iind01G0036680.1 Flavonoid F3H medium borderline
Iind01G0036680.2 Flavonoid F3H medium borderline
Iind02G0003130.1 Flavonoid F3H medium borderline
Iind02G0003140.1 Flavonoid F3H medium borderline
Iind02G0003170.1 Flavonoid F3H medium borderline
Iind02G0003850.1 Flavonoid F3H medium borderline
Iind02G0003850.2 Flavonoid F3H medium borderline
Iind02G0005300.1 Flavonoid F3H medium borderline
Iind02G0005310.1 Flavonoid F3H medium borderline
Iind02G0005330.1 Flavonoid F3H medium borderline
Iind02G0010690.1 Flavonoid F3H medium borderline
Iind02G0012580.1 Flavonoid F3H low borderline
Iind02G0012590.1 Flavonoid F3H low borderline
Iind02G0012590.2 Flavonoid F3H low borderline
Iind02G0012590.3 Flavonoid F3H low borderline
Iind02G0014080.1 Flavonoid F3H medium borderline
Iind02G0026150.1 Flavonoid F3H medium borderline
Iind02G0031260.1 Flavonoid F3H low borderline