PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Iind02G0034480.1 Flavonoid F3H medium borderline
Iind02G0039840.1 Flavonoid F3H low borderline
Iind02G0042260.1 Flavonoid F3H low borderline
Iind02G0042270.1 Flavonoid F3H low borderline
Iind03G0001370.1 Flavonoid F3H medium borderline
Iind03G0017810.1 Flavonoid F3H medium borderline
Iind03G0017820.1 Flavonoid F3H medium borderline
Iind03G0020520.1 Flavonoid F3H medium borderline
Iind03G0020520.2 Flavonoid F3H medium borderline
Iind03G0020530.1 Flavonoid F3H medium borderline
Iind03G0020530.2 Flavonoid F3H medium borderline
Iind03G0025880.1 Flavonoid F3H medium borderline
Iind03G0026580.1 Flavonoid F3H medium borderline
Iind03G0028180.1 Flavonoid F3H medium borderline
Iind04G0002940.1 Flavonoid F3H medium borderline
Iind04G0009740.1 Flavonoid F3H medium borderline
Iind04G0011470.1 Flavonoid F3H medium borderline
Iind04G0011470.2 Flavonoid F3H medium borderline
Iind04G0013640.1 Flavonoid F3H low borderline
Iind04G0017470.1 Flavonoid F3H medium borderline
Iind04G0017480.1 Flavonoid F3H medium borderline
Iind04G0017490.1 Flavonoid F3H medium borderline
Iind04G0017490.2 Flavonoid F3H medium borderline
Iind04G0020880.1 Flavonoid F3H medium borderline
Iind04G0020900.1 Flavonoid F3H medium borderline
Iind04G0025640.1 Flavonoid F3H low borderline
Iind04G0027280.1 Flavonoid F3H medium borderline
Iind05G0011550.1 Flavonoid F3H medium borderline
Iind05G0015960.1 Flavonoid F3H medium borderline
Iind05G0015960.2 Flavonoid F3H medium borderline
Iind05G0016760.1 Flavonoid F3H medium borderline
Iind05G0016760.2 Flavonoid F3H medium borderline
Iind05G0017340.1 Flavonoid F3H low borderline
Iind05G0017340.2 Flavonoid F3H low borderline
Iind05G0017350.1 Flavonoid F3H low borderline
Iind05G0017350.2 Flavonoid F3H low borderline
Iind05G0017350.3 Flavonoid F3H low borderline
Iind05G0021920.1 Flavonoid F3H medium borderline
Iind05G0021920.2 Flavonoid F3H medium borderline
Iind05G0022480.1 Flavonoid F3H low borderline
Iind05G0023720.1 Flavonoid F3H medium borderline
Iind05G0024230.1 Flavonoid F3H medium borderline
Iind05G0026590.1 Flavonoid F3H medium borderline
Iind05G0026600.1 Flavonoid F3H medium borderline
Iind05G0026670.1 Flavonoid F3H medium pass
Iind05G0026790.1 Flavonoid F3H medium borderline
Iind06G0000570.1 Flavonoid F3H medium borderline
Iind06G0000580.1 Flavonoid F3H medium borderline
Iind06G0002490.1 Flavonoid F3H medium borderline
Iind06G0003560.1 Flavonoid F3H medium borderline