PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Iind00G0004380.1 Alkaloid T3O low borderline
Iind00G0007370.1 Alkaloid T3O medium pass
Iind00G0008690.1 Alkaloid T3O medium borderline
Iind00G0009070.1 Alkaloid T3O medium borderline
Iind00G0009080.1 Alkaloid T3O medium borderline
Iind00G0009120.1 Alkaloid T3O medium borderline
Iind00G0009130.1 Alkaloid T3O medium borderline
Iind00G0013300.1 Alkaloid T3O medium pass
Iind00G0013300.3 Alkaloid T3O medium pass
Iind00G0015750.1 Alkaloid T3O medium borderline
Iind00G0015760.1 Alkaloid T3O medium borderline
Iind00G0015770.1 Alkaloid T3O medium borderline
Iind00G0015770.2 Alkaloid T3O medium borderline
Iind00G0015780.1 Alkaloid T3O medium borderline
Iind00G0015780.2 Alkaloid T3O medium borderline
Iind00G0015800.1 Alkaloid T3O medium borderline
Iind00G0015810.1 Alkaloid T3O medium borderline
Iind00G0015820.1 Alkaloid T3O medium borderline
Iind00G0015840.1 Alkaloid T3O medium borderline
Iind00G0015850.1 Alkaloid T3O medium borderline
Iind00G0015860.1 Alkaloid T3O medium borderline
Iind00G0015870.1 Alkaloid T3O medium borderline
Iind00G0015880.1 Alkaloid T3O medium borderline
Iind00G0015890.1 Alkaloid T3O medium borderline
Iind00G0015890.2 Alkaloid T3O medium borderline
Iind00G0015890.3 Alkaloid T3O medium borderline
Iind00G0015890.4 Alkaloid T3O medium borderline
Iind00G0021870.1 Alkaloid T3O medium pass
Iind00G0021870.3 Alkaloid T3O medium pass
Iind00G0021870.4 Alkaloid T3O medium pass
Iind00G0023690.1 Alkaloid T3O medium borderline
Iind00G0027770.1 Alkaloid T3O low borderline
Iind00G0028310.1 Alkaloid T3O medium borderline
Iind00G0031030.1 Alkaloid T3O low borderline
Iind00G0032180.1 Alkaloid T3O medium borderline
Iind00G0032190.1 Alkaloid T3O medium borderline
Iind01G0001130.1 Alkaloid T3O medium borderline
Iind01G0003320.1 Alkaloid T3O medium borderline
Iind01G0004480.1 Alkaloid T3O medium pass
Iind01G0004690.1 Alkaloid T3O medium borderline
Iind01G0012280.1 Alkaloid T3O low borderline
Iind01G0023320.1 Alkaloid T3O medium borderline
Iind01G0038520.1 Alkaloid T3O medium borderline
Iind01G0038540.1 Alkaloid T3O medium borderline
Iind01G0038550.1 Alkaloid T3O medium borderline
Iind01G0044120.1 Alkaloid T3O low borderline
Iind02G0000630.1 Alkaloid T3O low borderline
Iind02G0003970.1 Alkaloid T3O medium pass
Iind02G0003970.2 Alkaloid T3O medium pass
Iind02G0003970.3 Alkaloid T3O medium pass