PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Iind02G0011290.1 Alkaloid T3O medium pass
Iind02G0011580.1 Alkaloid T3O medium borderline
Iind02G0011580.2 Alkaloid T3O medium borderline
Iind02G0011580.3 Alkaloid T3O medium borderline
Iind02G0011630.1 Alkaloid T3O medium borderline
Iind02G0011660.1 Alkaloid T3O low borderline
Iind02G0012210.1 Alkaloid T3O medium borderline
Iind02G0017550.1 Alkaloid T3O medium pass
Iind02G0017550.2 Alkaloid T3O medium pass
Iind02G0017550.3 Alkaloid T3O medium pass
Iind02G0026560.1 Alkaloid T3O medium borderline
Iind02G0028200.1 Alkaloid T3O medium pass
Iind02G0031360.1 Alkaloid T3O medium borderline
Iind02G0039470.1 Alkaloid T3O medium borderline
Iind02G0045080.1 Alkaloid T3O medium pass
Iind02G0045160.1 Alkaloid T3O medium pass
Iind03G0002670.1 Alkaloid T3O medium borderline
Iind03G0003160.1 Alkaloid T3O medium borderline
Iind03G0013190.1 Alkaloid T3O medium borderline
Iind03G0013190.2 Alkaloid T3O medium borderline
Iind03G0019360.1 Alkaloid T3O medium borderline
Iind03G0019390.1 Alkaloid T3O medium borderline
Iind03G0019410.1 Alkaloid T3O medium borderline
Iind03G0019430.1 Alkaloid T3O medium borderline
Iind03G0025790.1 Alkaloid T3O medium pass
Iind03G0025790.2 Alkaloid T3O medium pass
Iind04G0002040.1 Alkaloid T3O medium borderline
Iind04G0002050.1 Alkaloid T3O medium borderline
Iind04G0002060.1 Alkaloid T3O medium borderline
Iind04G0002070.1 Alkaloid T3O medium borderline
Iind04G0002070.2 Alkaloid T3O medium borderline
Iind04G0002070.3 Alkaloid T3O medium borderline
Iind04G0002080.1 Alkaloid T3O medium borderline
Iind04G0005540.1 Alkaloid T3O medium borderline
Iind04G0015810.1 Alkaloid T3O medium pass
Iind04G0017780.1 Alkaloid T3O medium borderline
Iind04G0024460.1 Alkaloid T3O medium pass
Iind04G0024460.4 Alkaloid T3O medium pass
Iind04G0029040.1 Alkaloid T3O medium borderline
Iind05G0002100.1 Alkaloid T3O medium borderline
Iind05G0012540.1 Alkaloid T3O medium borderline
Iind05G0015450.1 Alkaloid T3O medium pass
Iind05G0015460.1 Alkaloid T3O low borderline
Iind05G0015470.1 Alkaloid T3O medium pass
Iind05G0015490.1 Alkaloid T3O medium pass
Iind05G0020330.1 Alkaloid T3O medium pass
Iind05G0020330.2 Alkaloid T3O low borderline
Iind05G0020330.3 Alkaloid T3O medium pass
Iind05G0020330.4 Alkaloid T3O low borderline
Iind05G0021120.1 Alkaloid T3O medium borderline