PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Iind03G0023340.2 Rosmarinic Acid 4CL low borderline
Iind03G0032840.1 Rosmarinic Acid 4CL low borderline
Iind04G0000990.1 Rosmarinic Acid 4CL medium pass
Iind04G0000990.2 Rosmarinic Acid 4CL medium pass
Iind04G0000990.3 Rosmarinic Acid 4CL medium pass
Iind04G0000990.4 Rosmarinic Acid 4CL medium pass
Iind04G0000990.5 Rosmarinic Acid 4CL medium pass
Iind04G0000990.6 Rosmarinic Acid 4CL medium pass
Iind04G0000990.7 Rosmarinic Acid 4CL medium pass
Iind04G0000990.8 Rosmarinic Acid 4CL low borderline
Iind04G0001000.1 Rosmarinic Acid 4CL low borderline
Iind04G0011050.1 Rosmarinic Acid 4CL low borderline
Iind04G0011050.2 Rosmarinic Acid 4CL low borderline
Iind05G0006780.1 Rosmarinic Acid 4CL low borderline
Iind05G0006780.2 Rosmarinic Acid 4CL low borderline
Iind05G0006780.3 Rosmarinic Acid 4CL low borderline
Iind05G0006780.6 Rosmarinic Acid 4CL low borderline
Iind05G0012990.1 Rosmarinic Acid 4CL low borderline
Iind05G0013010.1 Rosmarinic Acid 4CL low borderline
Iind05G0016680.1 Rosmarinic Acid 4CL low borderline
Iind05G0020010.1 Rosmarinic Acid 4CL medium pass
Iind05G0024920.1 Rosmarinic Acid 4CL low borderline
Iind05G0024920.2 Rosmarinic Acid 4CL low borderline
Iind05G0024920.3 Rosmarinic Acid 4CL low borderline
Iind06G0003340.1 Rosmarinic Acid 4CL low borderline
Iind06G0003660.1 Rosmarinic Acid 4CL medium pass
Iind06G0005220.1 Rosmarinic Acid 4CL medium pass
Iind06G0016510.1 Rosmarinic Acid 4CL medium pass
Iind06G0016530.1 Rosmarinic Acid 4CL medium pass
Iind06G0016550.1 Rosmarinic Acid 4CL medium pass
Iind06G0016570.1 Rosmarinic Acid 4CL medium pass
Iind06G0017920.1 Rosmarinic Acid 4CL medium pass
Iind06G0025620.1 Rosmarinic Acid 4CL medium pass
IindContig005830006240.1 Rosmarinic Acid 4CL medium pass
IindContig005830006240.2 Rosmarinic Acid 4CL medium pass
IindContig009080015020.1 Rosmarinic Acid 4CL medium pass
IindContig009590016830.1 Rosmarinic Acid 4CL medium pass
IindContig010760020700.1 Rosmarinic Acid 4CL low borderline
Iind00G0008690.1 Rosmarinic Acid C4H low borderline
Iind00G0008930.1 Rosmarinic Acid C4H low borderline
Iind00G0009070.1 Rosmarinic Acid C4H low borderline
Iind00G0009080.1 Rosmarinic Acid C4H low borderline
Iind00G0009120.1 Rosmarinic Acid C4H medium pass
Iind00G0009130.1 Rosmarinic Acid C4H medium pass
Iind00G0009730.1 Rosmarinic Acid C4H low borderline
Iind00G0014750.1 Rosmarinic Acid C4H low borderline
Iind00G0014750.2 Rosmarinic Acid C4H low borderline
Iind00G0015750.1 Rosmarinic Acid C4H low borderline
Iind00G0015760.1 Rosmarinic Acid C4H low borderline
Iind00G0015770.1 Rosmarinic Acid C4H low borderline