PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Iind03G0019390.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0019400.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0019410.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0019420.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0019430.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0035490.1 Steroid BR6OX2/CYP85A2 low borderline
Iind03G0035490.2 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0000250.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0005900.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0005930.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0005940.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0017780.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0017790.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0017800.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0025210.1 Steroid BR6OX2/CYP85A2 low borderline
Iind04G0029100.1 Steroid BR6OX2/CYP85A2 low borderline
Iind05G0012530.1 Steroid BR6OX2/CYP85A2 low borderline
Iind05G0012540.1 Steroid BR6OX2/CYP85A2 low borderline
Iind06G0006090.1 Steroid BR6OX2/CYP85A2 low borderline
Iind06G0006960.1 Steroid BR6OX2/CYP85A2 low borderline
Iind06G0030230.1 Steroid BR6OX2/CYP85A2 low borderline
Iind06G0030240.1 Steroid BR6OX2/CYP85A2 low borderline
Iind06G0038630.1 Steroid BR6OX2/CYP85A2 low borderline
IindContig007180009450.1 Steroid BR6OX2/CYP85A2 low borderline
IindContig009990018180.1 Steroid BR6OX2/CYP85A2 low borderline
IindContig009990018200.1 Steroid BR6OX2/CYP85A2 low borderline
IindContig009990018210.1 Steroid BR6OX2/CYP85A2 low borderline
IindContig009990018220.1 Steroid BR6OX2/CYP85A2 low borderline
Iind00G0007250.1 Steroid CAS medium pass
Iind00G0007250.2 Steroid CAS medium pass
Iind00G0007250.3 Steroid CAS medium pass
Iind00G0007250.4 Steroid CAS medium pass
Iind00G0011130.1 Steroid CAS medium pass
Iind00G0011130.2 Steroid CAS medium pass
Iind00G0011130.3 Steroid CAS medium pass
Iind00G0011130.4 Steroid CAS medium pass
Iind00G0016200.1 Steroid CAS low borderline
Iind00G0016230.1 Steroid CAS low borderline
Iind00G0016230.2 Steroid CAS low borderline
Iind00G0016240.1 Steroid CAS low borderline
Iind00G0016260.1 Steroid CAS low borderline
Iind00G0016270.1 Steroid CAS medium pass
Iind00G0034140.1 Steroid CAS low borderline
Iind01G0025320.1 Steroid CAS low borderline
Iind01G0041220.1 Steroid CAS medium pass
Iind03G0010160.1 Steroid CAS medium pass
Iind03G0010230.1 Steroid CAS medium pass
Iind03G0010230.2 Steroid CAS medium pass
Iind03G0012840.1 Steroid CAS medium pass
Iind03G0016740.1 Steroid CAS medium pass