PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Iind06G0026290.3 Alkaloid CODM/T6ODM medium borderline
Iind06G0026290.4 Alkaloid CODM/T6ODM medium borderline
Iind06G0026300.1 Alkaloid CODM/T6ODM low borderline
Iind06G0026320.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026890.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0026910.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0032810.1 Alkaloid CODM/T6ODM medium borderline
Iind06G0037000.1 Alkaloid CODM/T6ODM medium borderline
IindContig001800002990.1 Alkaloid CODM/T6ODM medium borderline
IindContig008940014420.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0005480.1 Alkaloid COR medium pass
Iind00G0011410.1 Alkaloid COR medium pass
Iind00G0032390.1 Alkaloid COR medium pass
Iind00G0032400.1 Alkaloid COR medium pass
Iind00G0032610.1 Alkaloid COR medium pass
Iind00G0032610.2 Alkaloid COR medium pass
Iind00G0032610.3 Alkaloid COR medium pass
Iind00G0032610.4 Alkaloid COR medium pass
Iind00G0032610.5 Alkaloid COR medium pass
Iind00G0032610.6 Alkaloid COR medium pass
Iind00G0032610.7 Alkaloid COR medium pass
Iind00G0032610.8 Alkaloid COR medium pass
Iind00G0032610.9 Alkaloid COR medium pass
Iind01G0025290.1 Alkaloid COR medium pass
Iind03G0008000.1 Alkaloid COR medium pass
Iind04G0010220.1 Alkaloid COR medium pass
Iind04G0010250.1 Alkaloid COR medium pass
Iind04G0010250.2 Alkaloid COR medium pass
Iind04G0010250.3 Alkaloid COR medium pass
Iind04G0010250.4 Alkaloid COR medium pass
Iind04G0010250.5 Alkaloid COR medium pass
Iind04G0010260.1 Alkaloid COR medium pass
Iind04G0010270.1 Alkaloid COR medium pass
Iind04G0010270.2 Alkaloid COR medium pass
Iind04G0022370.1 Alkaloid COR low borderline
Iind04G0027410.1 Alkaloid COR medium pass
Iind04G0032480.1 Alkaloid COR medium pass
Iind06G0019980.1 Alkaloid COR medium pass
Iind06G0026190.1 Alkaloid COR medium pass
Iind06G0030840.1 Alkaloid COR medium pass
Iind00G0016120.1 Alkaloid CYP719 low borderline
Iind00G0016120.2 Alkaloid CYP719 low borderline
Iind00G0016120.3 Alkaloid CYP719 low borderline
Iind01G0003570.1 Alkaloid CYP719 low borderline
Iind01G0034070.1 Alkaloid CYP719 medium borderline
Iind02G0010240.1 Alkaloid CYP719 medium borderline
Iind02G0010250.1 Alkaloid CYP719 medium borderline
Iind03G0019420.1 Alkaloid CYP719 medium borderline
Iind04G0025210.1 Alkaloid CYP719 medium borderline
Iind06G0011930.1 Alkaloid CYP719 medium borderline