PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Iind06G0018250.1 Alkaloid CYP719 medium borderline
Iind00G0009730.1 Alkaloid CYP80B1 medium borderline
Iind01G0004180.1 Alkaloid CYP80B1 medium borderline
Iind01G0038580.1 Alkaloid CYP80B1 medium borderline
Iind04G0005900.1 Alkaloid CYP80B1 medium borderline
Iind04G0005910.1 Alkaloid CYP80B1 low borderline
Iind04G0005930.1 Alkaloid CYP80B1 medium borderline
Iind04G0005940.1 Alkaloid CYP80B1 medium borderline
Iind06G0006560.1 Alkaloid CYP80B1 medium borderline
Iind00G0015830.1 Alkaloid G8O/G8H medium borderline
Iind00G0030350.1 Alkaloid G8O/G8H medium borderline
Iind00G0030400.1 Alkaloid G8O/G8H medium borderline
Iind01G0008990.1 Alkaloid G8O/G8H low borderline
Iind01G0023310.1 Alkaloid G8O/G8H medium borderline
Iind01G0023370.1 Alkaloid G8O/G8H medium borderline
Iind01G0034080.1 Alkaloid G8O/G8H medium borderline
Iind01G0038530.1 Alkaloid G8O/G8H medium borderline
Iind01G0038560.1 Alkaloid G8O/G8H medium borderline
Iind02G0010330.2 Alkaloid G8O/G8H medium borderline
Iind02G0011590.1 Alkaloid G8O/G8H medium borderline
Iind02G0033070.1 Alkaloid G8O/G8H medium borderline
Iind03G0003910.1 Alkaloid G8O/G8H low borderline
Iind03G0011070.1 Alkaloid G8O/G8H medium borderline
Iind03G0019340.1 Alkaloid G8O/G8H medium borderline
Iind03G0035490.1 Alkaloid G8O/G8H medium borderline
Iind03G0035490.2 Alkaloid G8O/G8H medium borderline
Iind04G0002060.2 Alkaloid G8O/G8H medium pass
Iind04G0006810.1 Alkaloid G8O/G8H low borderline
Iind04G0017770.1 Alkaloid G8O/G8H low borderline
Iind04G0022340.1 Alkaloid G8O/G8H medium borderline
Iind04G0025520.1 Alkaloid G8O/G8H low borderline
Iind05G0012530.1 Alkaloid G8O/G8H medium borderline
Iind06G0024610.1 Alkaloid G8O/G8H medium borderline
IindContig007520010300.1 Alkaloid G8O/G8H low borderline
IindContig008370012470.1 Alkaloid G8O/G8H medium borderline
IindContig009910017820.1 Alkaloid G8O/G8H low borderline
IindContig009990018190.1 Alkaloid G8O/G8H low borderline
Iind00G0008020.1 Alkaloid GES medium pass
Iind00G0016200.1 Alkaloid GES medium pass
Iind00G0016230.1 Alkaloid GES medium pass
Iind00G0016230.2 Alkaloid GES medium pass
Iind00G0016240.1 Alkaloid GES medium pass
Iind00G0016260.1 Alkaloid GES medium pass
Iind00G0016270.1 Alkaloid GES medium pass
Iind00G0023680.1 Alkaloid GES low borderline
Iind00G0034110.1 Alkaloid GES medium pass
Iind00G0034140.1 Alkaloid GES medium pass
Iind00G0034740.1 Alkaloid GES medium pass
Iind01G0025320.1 Alkaloid GES medium pass
Iind01G0041220.1 Alkaloid GES low borderline