PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
IindContig011130022050.1 Phenylpropanoid C3'H/CYP98A low borderline
Iind00G0015830.1 Phenylpropanoid C4H/CYP73A low borderline
Iind00G0030360.1 Phenylpropanoid C4H/CYP73A low borderline
Iind00G0030410.1 Phenylpropanoid C4H/CYP73A low borderline
Iind01G0003540.1 Phenylpropanoid C4H/CYP73A medium borderline
Iind01G0008990.1 Phenylpropanoid C4H/CYP73A low borderline
Iind03G0011080.1 Phenylpropanoid C4H/CYP73A low borderline
Iind03G0029210.1 Phenylpropanoid C4H/CYP73A low borderline
Iind04G0006810.1 Phenylpropanoid C4H/CYP73A medium borderline
Iind04G0017760.1 Phenylpropanoid C4H/CYP73A medium borderline
Iind04G0017770.1 Phenylpropanoid C4H/CYP73A medium pass
Iind04G0025210.1 Phenylpropanoid C4H/CYP73A medium borderline
Iind05G0039430.1 Phenylpropanoid C4H/CYP73A medium borderline
Iind06G0024610.1 Phenylpropanoid C4H/CYP73A low borderline
IindContig009990018190.1 Phenylpropanoid C4H/CYP73A medium pass
Iind00G0004150.1 Phenylpropanoid CAD low borderline
Iind00G0004150.2 Phenylpropanoid CAD medium pass
Iind00G0004150.3 Phenylpropanoid CAD medium pass
Iind00G0016200.1 Phenylpropanoid CAD low borderline
Iind00G0016230.1 Phenylpropanoid CAD low borderline
Iind00G0016230.2 Phenylpropanoid CAD low borderline
Iind00G0016240.1 Phenylpropanoid CAD low borderline
Iind00G0016260.1 Phenylpropanoid CAD low borderline
Iind00G0016270.1 Phenylpropanoid CAD medium pass
Iind00G0025080.1 Phenylpropanoid CAD low borderline
Iind00G0034110.1 Phenylpropanoid CAD low borderline
Iind00G0034140.1 Phenylpropanoid CAD low borderline
Iind00G0034790.1 Phenylpropanoid CAD medium borderline
Iind00G0038000.1 Phenylpropanoid CAD low borderline
Iind00G0038000.2 Phenylpropanoid CAD low borderline
Iind01G0017090.1 Phenylpropanoid CAD medium borderline
Iind01G0041220.1 Phenylpropanoid CAD low borderline
Iind02G0008100.1 Phenylpropanoid CAD medium borderline
Iind02G0008100.2 Phenylpropanoid CAD medium borderline
Iind02G0021250.1 Phenylpropanoid CAD low borderline
Iind02G0029290.1 Phenylpropanoid CAD low borderline
Iind02G0040420.1 Phenylpropanoid CAD medium borderline
Iind02G0040570.1 Phenylpropanoid CAD medium borderline
Iind03G0020150.1 Phenylpropanoid CAD medium pass
Iind03G0020150.2 Phenylpropanoid CAD medium pass
Iind04G0002240.3 Phenylpropanoid CAD medium borderline
Iind04G0028940.1 Phenylpropanoid CAD low borderline
Iind04G0028940.2 Phenylpropanoid CAD low borderline
Iind04G0028940.3 Phenylpropanoid CAD low borderline
Iind04G0028940.4 Phenylpropanoid CAD medium pass
Iind04G0028940.5 Phenylpropanoid CAD low borderline
Iind04G0028940.6 Phenylpropanoid CAD medium pass
Iind04G0028970.1 Phenylpropanoid CAD low borderline
Iind04G0028970.2 Phenylpropanoid CAD low borderline
Iind04G0028970.3 Phenylpropanoid CAD low borderline