PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Iind06G0024680.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0027390.5 Steroid DWF4/CYP90B1 medium borderline
Iind06G0027390.6 Steroid DWF4/CYP90B1 medium borderline
Iind06G0029890.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0030220.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0033600.1 Steroid DWF4/CYP90B1 low borderline
Iind06G0037690.1 Steroid DWF4/CYP90B1 low borderline
IindContig000070000180.1 Steroid DWF4/CYP90B1 medium borderline
IindContig000300000600.1 Steroid DWF4/CYP90B1 medium borderline
IindContig006980008850.1 Steroid DWF4/CYP90B1 medium borderline
IindContig008560012970.1 Steroid DWF4/CYP90B1 medium borderline
IindContig008560012970.2 Steroid DWF4/CYP90B1 medium borderline
IindContig009420016200.1 Steroid DWF4/CYP90B1 low borderline
IindContig009420016240.1 Steroid DWF4/CYP90B1 medium borderline
IindContig009420016250.1 Steroid DWF4/CYP90B1 medium borderline
IindContig009710017190.1 Steroid DWF4/CYP90B1 low borderline
IindContig009750017380.1 Steroid DWF4/CYP90B1 medium borderline
Iind02G0039360.1 Steroid DWF5 medium borderline
Iind04G0028710.1 Steroid DWF5 low borderline
Iind04G0028710.2 Steroid DWF5 low borderline
Iind04G0028710.3 Steroid DWF5 low borderline
Iind03G0036360.1 Steroid DWF7 medium pass
Iind03G0036360.2 Steroid DWF7 medium pass
Iind04G0012140.1 Steroid DWF7 low borderline
Iind04G0012140.2 Steroid DWF7 low borderline
Iind04G0012140.3 Steroid DWF7 low borderline
Iind06G0029850.1 Steroid FK high pass
Iind02G0017910.1 Steroid HYD1 high pass
Iind02G0003970.1 Steroid ROT3/CYP90C1 medium borderline
Iind02G0003970.2 Steroid ROT3/CYP90C1 medium borderline
Iind02G0003970.3 Steroid ROT3/CYP90C1 medium borderline
Iind02G0017550.2 Steroid ROT3/CYP90C1 medium borderline
Iind02G0017550.3 Steroid ROT3/CYP90C1 medium borderline
Iind02G0032220.1 Steroid ROT3/CYP90C1 low borderline
Iind02G0032280.1 Steroid ROT3/CYP90C1 low borderline
Iind03G0025790.3 Steroid ROT3/CYP90C1 medium borderline
Iind04G0015810.1 Steroid ROT3/CYP90C1 medium borderline
Iind04G0024660.2 Steroid ROT3/CYP90C1 medium borderline
Iind05G0037510.1 Steroid ROT3/CYP90C1 medium borderline
Iind06G0007760.1 Steroid ROT3/CYP90C1 medium borderline
Iind06G0027390.1 Steroid ROT3/CYP90C1 medium borderline
Iind06G0027390.2 Steroid ROT3/CYP90C1 medium borderline
Iind06G0027390.4 Steroid ROT3/CYP90C1 medium borderline
IindContig008890014180.1 Steroid ROT3/CYP90C1 low borderline
IindContig009530016640.1 Steroid ROT3/CYP90C1 low borderline
IindContig010900021230.1 Steroid ROT3/CYP90C1 medium borderline
IindContig010900021230.2 Steroid ROT3/CYP90C1 medium borderline
IindContig010900021230.3 Steroid ROT3/CYP90C1 medium borderline
Iind01G0038360.1 Steroid SMO1/SMO2 medium pass
Iind02G0006070.1 Steroid SMO1/SMO2 medium pass