PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
IindContig009990018210.1 Terpenoid CYP76 medium pass
IindContig009990018220.1 Terpenoid CYP76 medium pass
IindContig011130022050.1 Terpenoid CYP76 low borderline
Iind00G0005060.1 Terpenoid DXR high pass
Iind00G0005250.1 Terpenoid DXR high pass
Iind01G0009730.1 Terpenoid DXS medium pass
Iind01G0009730.2 Terpenoid DXS medium pass
Iind03G0017730.1 Terpenoid DXS medium pass
Iind03G0017730.2 Terpenoid DXS medium pass
Iind05G0015800.1 Terpenoid DXS medium pass
Iind05G0015800.2 Terpenoid DXS medium pass
Iind05G0015800.3 Terpenoid DXS medium pass
Iind05G0015800.4 Terpenoid DXS medium pass
Iind00G0019150.1 Terpenoid FPPS medium pass
Iind00G0019150.2 Terpenoid FPPS medium pass
Iind00G0019150.3 Terpenoid FPPS medium pass
Iind00G0019150.4 Terpenoid FPPS medium pass
Iind01G0021750.1 Terpenoid FPPS medium pass
Iind01G0021760.1 Terpenoid FPPS medium pass
Iind04G0022410.1 Terpenoid FPPS medium pass
Iind04G0022420.1 Terpenoid FPPS medium pass
Iind05G0004680.1 Terpenoid FPPS medium pass
Iind05G0017690.1 Terpenoid FPPS medium pass
Iind05G0017690.2 Terpenoid FPPS medium pass
Iind00G0028300.1 Terpenoid GGPPS medium borderline
Iind02G0015310.1 Terpenoid GGPPS medium borderline
Iind02G0015340.1 Terpenoid GGPPS medium borderline
Iind03G0002440.1 Terpenoid GGPPS medium borderline
Iind03G0002460.1 Terpenoid GGPPS medium borderline
Iind03G0010670.1 Terpenoid GGPPS low borderline
Iind03G0019280.1 Terpenoid GGPPS medium borderline
Iind03G0019290.1 Terpenoid GGPPS medium borderline
Iind03G0019300.1 Terpenoid GGPPS medium borderline
Iind03G0019310.1 Terpenoid GGPPS medium borderline
Iind03G0024840.1 Terpenoid GGPPS medium borderline
Iind04G0013550.1 Terpenoid GGPPS medium borderline
Iind04G0029430.1 Terpenoid GGPPS medium borderline
Iind05G0038030.1 Terpenoid GGPPS medium borderline
Iind05G0040870.1 Terpenoid GGPPS medium borderline
Iind06G0002530.1 Terpenoid GGPPS medium borderline
IindContig009030014870.1 Terpenoid GGPPS medium borderline
Iind05G0035690.1 Terpenoid HDR/IspH high pass
Iind05G0035690.2 Terpenoid HDR/IspH high pass
Iind06G0039740.1 Terpenoid HDR/IspH low borderline
Iind06G0039740.2 Terpenoid HDR/IspH low borderline
Iind01G0019980.1 Terpenoid HDS/IspG high pass
Iind01G0031840.1 Terpenoid HDS/IspG medium pass
Iind03G0023360.2 Terpenoid HDS/IspG low borderline
Iind04G0023320.1 Terpenoid HDS/IspG medium pass
Iind05G0004490.1 Terpenoid HDS/IspG medium pass