PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
IindContig010610020180.1 Terpenoid HDS/IspG medium pass
IindContig010610020180.2 Terpenoid HDS/IspG medium pass
Iind03G0003980.1 Terpenoid HMGR medium pass
Iind03G0004000.1 Terpenoid HMGR medium pass
Iind04G0031930.1 Terpenoid HMGR low borderline
Iind06G0004630.1 Terpenoid HMGR medium pass
Iind06G0004630.2 Terpenoid HMGR medium pass
Iind01G0038010.1 Terpenoid HMGS high pass
Iind01G0038010.2 Terpenoid HMGS high pass
Iind03G0007010.1 Terpenoid HMGS low borderline
Iind04G0019800.1 Terpenoid HMGS low borderline
Iind04G0023940.1 Terpenoid HMGS low borderline
Iind05G0008610.1 Terpenoid HMGS low borderline
Iind03G0036170.1 Terpenoid IDI medium pass
Iind05G0013750.2 Terpenoid IDI low borderline
Iind05G0013770.1 Terpenoid IDI low borderline
Iind00G0017650.1 Terpenoid MCT/IspD high pass
Iind00G0017650.2 Terpenoid MCT/IspD high pass
Iind00G0017650.3 Terpenoid MCT/IspD high pass
Iind02G0027510.1 Terpenoid MCT/IspD low borderline
Iind02G0027510.2 Terpenoid MCT/IspD low borderline
Iind02G0027510.3 Terpenoid MCT/IspD low borderline
Iind04G0013130.1 Terpenoid MCT/IspD low borderline
Iind00G0037140.1 Terpenoid MDS/IspF high pass
Iind00G0026160.1 Terpenoid MVD medium pass
Iind01G0003600.1 Terpenoid MVD low borderline
Iind02G0015180.1 Terpenoid MVD low borderline
Iind03G0004110.1 Terpenoid MVD medium pass
Iind06G0031210.1 Terpenoid MVD medium pass
Iind00G0010790.1 Terpenoid MVK medium pass
Iind03G0003800.1 Terpenoid MVK low borderline
Iind03G0032310.3 Terpenoid MVK low borderline
Iind05G0005590.1 Terpenoid MVK low borderline
Iind02G0028400.1 Terpenoid PMK medium pass
Iind02G0028400.2 Terpenoid PMK medium pass
Iind00G0008020.1 Terpenoid TPS medium pass
Iind00G0016200.1 Terpenoid TPS medium pass
Iind00G0016230.1 Terpenoid TPS medium pass
Iind00G0016230.2 Terpenoid TPS medium pass
Iind00G0016240.1 Terpenoid TPS medium pass
Iind00G0016260.1 Terpenoid TPS medium pass
Iind00G0016270.1 Terpenoid TPS medium pass
Iind00G0023680.1 Terpenoid TPS medium pass
Iind00G0034110.1 Terpenoid TPS medium pass
Iind00G0034140.1 Terpenoid TPS low borderline
Iind00G0034740.1 Terpenoid TPS medium pass
Iind01G0025320.1 Terpenoid TPS medium pass
Iind01G0041220.1 Terpenoid TPS medium pass
Iind02G0036590.1 Terpenoid TPS medium pass
Iind02G0037980.1 Terpenoid TPS medium pass