PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_717.g50.t1 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_733.g75.t1 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
ocimum_basilicum_733.g77.t1 Flavonoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
ocimum_basilicum_757.g114.t1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_816.g3.t1 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_897.g46.t1 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_973.g55.t1 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
ocimum_basilicum_1023.g127.t1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_1242.g55.t1 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
ocimum_basilicum_1320.g54.t1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_1717.g8.t1 Phenylpropanoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
ocimum_basilicum_1879.g47.t1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_1887.g49.t1 Phenylpropanoid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
ocimum_basilicum_1968.g112.t1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_1973.g86.t1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_362423.g2.t1 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
ocimum_basilicum_363592.g1.t1 Phenylpropanoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_366000.g1.t1 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_369344.g1.t1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_369733.g1.t1 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
ocimum_basilicum_375652.g2.t1 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_376436.g2.t1 Phenylpropanoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_377587.g14.t1 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_377680.g3.t1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_379.g214.t1 Phenylpropanoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
ocimum_basilicum_380212.g4.t1 Phenylpropanoid 4CL medium pass 4CL__00003__sp_M4ISH0_CCL1_HUMLU
ocimum_basilicum_380446.g1.t1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_381158.g17.t1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_381165.g12.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_381165.g6.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_381423.g31.t1 Phenylpropanoid 4CL low borderline 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_381562.g3.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_381562.g7.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_381562.g9.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_381679.g10.t1 Phenylpropanoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
ocimum_basilicum_381732.g1.t1 Phenylpropanoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_382093.g17.t1 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
ocimum_basilicum_382178.g3.t1 Phenylpropanoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
ocimum_basilicum_382284.g12.t1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_382708.g2.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_382708.g4.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_382708.g5.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_382779.g40.t1 Phenylpropanoid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
ocimum_basilicum_382794.g40.t1 Phenylpropanoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
ocimum_basilicum_382864.g1.t1 Phenylpropanoid 4CL medium pass 4CL__00002__sp_I3PB37_4CL1_PETHY
ocimum_basilicum_382917.g22.t1 Phenylpropanoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_383079.g33.t1 Phenylpropanoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
ocimum_basilicum_383264.g21.t1 Phenylpropanoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
ocimum_basilicum_383304.g4.t1 Phenylpropanoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
ocimum_basilicum_383331.g16.t1 Phenylpropanoid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH