PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_1003.g1.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1083.g1.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1083.g4.t1 Terpenoid CYP76 low borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ocimum_basilicum_1102.g6.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1130.g1.t1 Terpenoid CYP76 medium pass CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
ocimum_basilicum_1130.g4.t1 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ocimum_basilicum_1179.g14.t1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1179.g15.t1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1179.g16.t1 Terpenoid CYP76 medium pass CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ocimum_basilicum_1209.g9.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1259.g1.t1 Terpenoid CYP76 low borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
ocimum_basilicum_1276.g37.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1276.g38.t1 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
ocimum_basilicum_1344.g10.t1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1344.g11.t1 Terpenoid CYP76 medium borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1356.g2.t1 Terpenoid CYP76 medium borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
ocimum_basilicum_1356.g3.t1 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
ocimum_basilicum_1362.g4.t1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1408.g2.t1 Terpenoid CYP76 medium borderline CYP76__00006__sp_A0A1D8QMD1_C76K6_SALFT
ocimum_basilicum_1408.g3.t1 Terpenoid CYP76 medium pass CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
ocimum_basilicum_1521.g12.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1521.g17.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1538.g4.t1 Terpenoid CYP76 low borderline CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1551.g113.t1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1551.g114.t1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ocimum_basilicum_1551.g115.t1 Terpenoid CYP76 medium pass CYP76__00013__sp_D1MI46_C76BA_SWEMU
ocimum_basilicum_1560.g78.t1 Terpenoid CYP76 low borderline CYP76__00007__sp_A0A1D8QMD2_C76K7_ROSOF
ocimum_basilicum_1560.g90.t1 Terpenoid CYP76 low borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ocimum_basilicum_1568.g34.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1568.g35.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1583.g16.t1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1583.g33.t1 Terpenoid CYP76 medium borderline CYP76__00008__sp_A0A1D8QMG4_C76K8_ROSOF
ocimum_basilicum_1593.g21.t1 Terpenoid CYP76 medium pass CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1593.g22.t1 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
ocimum_basilicum_1627.g1.t1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ocimum_basilicum_1681.g19.t1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1701.g210.t1 Terpenoid CYP76 low borderline CYP76__00016__sp_P0DXJ6_C7631_LOPWI
ocimum_basilicum_1721.g7.t1 Terpenoid CYP76 low borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
ocimum_basilicum_1737.g16.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1822.g13.t1 Terpenoid CYP76 medium pass CYP76__00019__sp_Q6YTF1_C76M8_ORYSJ
ocimum_basilicum_1834.g9.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1842.g63.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1842.g64.t1 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
ocimum_basilicum_1846.g1.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1869.g23.t1 Terpenoid CYP76 medium borderline CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1870.g30.t1 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
ocimum_basilicum_1874.g29.t1 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1874.g35.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
ocimum_basilicum_1908.g32.t1 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
ocimum_basilicum_1925.g20.t1 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU