PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
ocimum_basilicum_382790.g49.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_382836.g36.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_382855.g33.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_382987.g3.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383062.g30.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383065.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383065.g3.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383166.g1.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383259.g1.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_383279.g95.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383639.g14.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383639.g16.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_383772.g69.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g11.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g12.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g13.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g15.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g16.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g20.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g24.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g25.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384464.g7.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384595.g4.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_384765.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_384929.g226.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_385027.g18.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385223.g19.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385223.g24.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_385223.g70.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385316.g59.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385365.g107.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385590.g12.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385728.g76.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385763.g18.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385991.g29.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385991.g34.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_385991.g35.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_386068.g59.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_397555.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_428678.g3.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_428679.g4.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_428949.g6.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_428950.g5.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_451.g135.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_451.g151.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_455.g135.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_468.g88.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_486.g48.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_507.g85.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_507.g86.t1 Steroid CYP90D1 low borderline