PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
ocimum_basilicum_512.g30.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_515.g77.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_522.g183.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_523.g213.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_544961.g7.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_544962.g7.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_545.g65.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_546669.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_546670.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_549.g210.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_564.g117.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570204.g17.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_570205.g18.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_570249.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570250.g5.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570251.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570254.g5.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570323.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_570324.g2.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_650.g25.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_671.g55.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_671.g56.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_680.g91.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_701.g157.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_706.g32.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_708.g68.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_716.g108.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_716.g34.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_716.g53.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_716.g65.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_740.g4.t1 Steroid CYP90D1 medium borderline
ocimum_basilicum_740.g77.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_746.g12.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_746.g27.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_749.g35.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_749.g36.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_749.g46.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_923.g12.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_935.g187.t1 Steroid CYP90D1 low borderline
ocimum_basilicum_935.g190.t1 Steroid CYP90D1 low borderline