PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
ocimum_basilicum_1979.g159.t1 Flavonoid F3H medium borderline
ocimum_basilicum_1986.g42.t1 Flavonoid F3H medium borderline
ocimum_basilicum_274683.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_274683.g3.t1 Flavonoid F3H medium borderline
ocimum_basilicum_303579.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_337627.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_343640.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_350368.g2.t1 Flavonoid F3H low borderline
ocimum_basilicum_350670.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_350670.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_361725.g2.t1 Flavonoid F3H low borderline
ocimum_basilicum_365170.g1.t1 Flavonoid F3H low borderline
ocimum_basilicum_365580.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_368826.g2.t1 Flavonoid F3H low borderline
ocimum_basilicum_371.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_371977.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_372357.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_372357.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_372357.g3.t1 Flavonoid F3H medium borderline
ocimum_basilicum_373.g135.t1 Flavonoid F3H medium borderline
ocimum_basilicum_373.g99.t1 Flavonoid F3H medium borderline
ocimum_basilicum_375.g167.t1 Flavonoid F3H medium borderline
ocimum_basilicum_375837.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_376041.g12.t1 Flavonoid F3H medium borderline
ocimum_basilicum_376041.g14.t1 Flavonoid F3H medium borderline
ocimum_basilicum_376558.g6.t1 Flavonoid F3H medium borderline
ocimum_basilicum_376710.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_376710.g2.t1 Flavonoid F3H low borderline
ocimum_basilicum_376710.g3.t1 Flavonoid F3H medium borderline
ocimum_basilicum_377.g44.t1 Flavonoid F3H medium borderline
ocimum_basilicum_377.g79.t1 Flavonoid F3H medium borderline
ocimum_basilicum_377339.g5.t1 Flavonoid F3H medium borderline
ocimum_basilicum_377604.g3.t1 Flavonoid F3H medium borderline
ocimum_basilicum_377760.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_378.g118.t1 Flavonoid F3H medium borderline
ocimum_basilicum_379.g11.t1 Flavonoid F3H medium borderline
ocimum_basilicum_379.g13.t1 Flavonoid F3H medium borderline
ocimum_basilicum_379.g14.t1 Flavonoid F3H medium borderline
ocimum_basilicum_379.g172.t1 Flavonoid F3H low borderline
ocimum_basilicum_379.g180.t1 Flavonoid F3H low borderline
ocimum_basilicum_380324.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_380463.g7.t1 Flavonoid F3H low borderline
ocimum_basilicum_380463.g8.t1 Flavonoid F3H low borderline
ocimum_basilicum_380492.g5.t1 Flavonoid F3H low borderline
ocimum_basilicum_380561.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_381476.g14.t1 Flavonoid F3H medium borderline
ocimum_basilicum_381812.g35.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382079.g11.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382130.g26.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382142.g29.t1 Flavonoid F3H medium borderline