PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
ocimum_basilicum_382142.g30.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382305.g17.t1 Flavonoid F3H low borderline
ocimum_basilicum_382351.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382389.g40.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382403.g37.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382403.g40.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382403.g49.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382403.g50.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382403.g53.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382429.g5.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382430.g27.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382555.g44.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382557.g2.t1 Flavonoid F3H low borderline
ocimum_basilicum_382599.g18.t1 Flavonoid F3H low borderline
ocimum_basilicum_382614.g53.t1 Flavonoid F3H low borderline
ocimum_basilicum_382614.g55.t1 Flavonoid F3H low borderline
ocimum_basilicum_382758.g31.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382779.g46.t1 Flavonoid F3H medium borderline
ocimum_basilicum_382865.g1.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383132.g22.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383132.g28.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383132.g29.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383245.g85.t1 Flavonoid F3H medium pass
ocimum_basilicum_383245.g87.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383245.g89.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383254.g42.t1 Flavonoid F3H low borderline
ocimum_basilicum_383347.g7.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383347.g8.t1 Flavonoid F3H low borderline
ocimum_basilicum_383443.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383513.g2.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383513.g8.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383527.g7.t1 Flavonoid F3H medium pass
ocimum_basilicum_383552.g61.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383552.g62.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383586.g16.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383586.g86.t1 Flavonoid F3H low borderline
ocimum_basilicum_383613.g9.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383623.g12.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383635.g46.t1 Flavonoid F3H low borderline
ocimum_basilicum_383637.g58.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383637.g59.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383637.g62.t1 Flavonoid F3H low borderline
ocimum_basilicum_383637.g74.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383645.g21.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383696.g5.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383696.g6.t1 Flavonoid F3H medium borderline
ocimum_basilicum_383696.g7.t1 Flavonoid F3H medium borderline
ocimum_basilicum_384002.g14.t1 Flavonoid F3H medium borderline
ocimum_basilicum_384010.g3.t1 Flavonoid F3H medium pass
ocimum_basilicum_384160.g1.t1 Flavonoid F3H medium pass