PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status Best Target
ocimum_basilicum_482.g97.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_483.g134.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_499.g5.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_507.g100.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_507.g102.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_508.g12.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_508.g20.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_508.g23.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_508.g26.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_519.g36.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_523.g237.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_523.g242.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_536600.g4.t1 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
ocimum_basilicum_536602.g4.t1 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
ocimum_basilicum_537745.g1.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_552.g26.t1 Flavonoid F3H medium borderline F3H__00004__sp_Q7XR84_FL3H3_ORYSJ
ocimum_basilicum_553.g48.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_553.g51.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_553.g53.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g226.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g230.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g231.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g234.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g236.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g71.t1 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_558.g99.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_564.g69.t1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
ocimum_basilicum_564.g72.t1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
ocimum_basilicum_564.g74.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_564.g75.t1 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
ocimum_basilicum_564.g78.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_564.g80.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_585.g2.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_586.g3.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_661.g37.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_661.g39.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_677.g13.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_677.g14.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_683.g18.t1 Flavonoid F3H low borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_695.g54.t1 Flavonoid F3H low borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_697.g53.t1 Flavonoid F3H low borderline F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
ocimum_basilicum_697.g54.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_698.g40.t1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
ocimum_basilicum_706.g29.t1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
ocimum_basilicum_707.g75.t1 Flavonoid F3H medium borderline F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
ocimum_basilicum_715.g9.t1 Flavonoid F3H medium pass F3H__00004__sp_Q7XR84_FL3H3_ORYSJ
ocimum_basilicum_721.g29.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_726.g79.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_728.g6.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
ocimum_basilicum_728.g7.t1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ