PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_386068.g60.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_386068.g63.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_386068.g64.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_386138.g1.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_388316.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_388323.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_388324.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_388325.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_397555.g1.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_428678.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_428679.g2.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_451.g150.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_455.g134.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_501.g155.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_504.g76.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_506.g27.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_511.g46.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_511.g66.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_516.g129.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_516.g130.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_532640.g1.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_546669.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_546670.g1.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_551.g105.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_553.g6.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_564.g100.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_564.g104.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_564.g108.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_564.g95.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_564.g99.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_570101.g3.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_570250.g4.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_570250.g8.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_570254.g4.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_570254.g7.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_570426.g1.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_691.g37.t1 Alkaloid G8O/G8H low borderline
ocimum_basilicum_716.g49.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_724.g44.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_725.g4.t1 Alkaloid G8O/G8H medium borderline
ocimum_basilicum_749.g40.t1 Alkaloid G8O/G8H medium pass
ocimum_basilicum_935.g186.t1 Alkaloid G8O/G8H medium borderline