PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_383332.g91.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_383332.g97.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_383362.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_383373.g14.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_383527.g81.t1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
ocimum_basilicum_383539.g33.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_383539.g35.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_383788.g92.t1 Alkaloid GES medium pass GES__00010__sp_Q93YV0_GES_ARATH
ocimum_basilicum_383818.g20.t1 Alkaloid GES low borderline GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_383818.g22.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_383818.g28.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_384143.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_384143.g2.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_384267.g1.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_384278.g7.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_384446.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_384917.g39.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_384917.g41.t1 Alkaloid GES medium pass GES__00002__sp_C0KWV4_GRNLG_PERFH
ocimum_basilicum_384917.g50.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_384917.g51.t1 Alkaloid GES medium pass GES__00003__sp_C0KWV6_GRNL7_PERFR
ocimum_basilicum_384917.g63.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_384929.g276.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
ocimum_basilicum_384929.g99.t1 Alkaloid GES low borderline GES__00011__sp_R9QMR5_ATERP_PINBN
ocimum_basilicum_385223.g29.t1 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_385316.g6.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_385334.g9.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g10.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g11.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g12.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g8.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385490.g9.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385604.g12.t1 Alkaloid GES medium pass GES__00003__sp_C0KWV6_GRNL7_PERFR
ocimum_basilicum_385713.g1.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385960.g18.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_385960.g19.t1 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
ocimum_basilicum_386072.g23.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_386072.g45.t1 Alkaloid GES medium pass GES__00003__sp_C0KWV6_GRNL7_PERFR
ocimum_basilicum_386072.g46.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_386072.g48.t1 Alkaloid GES medium pass GES__00003__sp_C0KWV6_GRNL7_PERFR
ocimum_basilicum_386072.g51.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_386135.g4.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_386161.g58.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_449.g75.t1 Alkaloid GES medium pass GES__00006__sp_Q4JHG3_GRNLC_PERFH
ocimum_basilicum_483.g87.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_509.g23.t1 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
ocimum_basilicum_520.g183.t1 Alkaloid GES medium pass GES__00002__sp_C0KWV4_GRNLG_PERFH
ocimum_basilicum_520.g188.t1 Alkaloid GES medium pass GES__00005__sp_Q308N0_GRNL6_PERFR
ocimum_basilicum_532640.g4.t1 Alkaloid GES low borderline GES__00008__sp_Q84ZW8_ACSS_MAIZE
ocimum_basilicum_539426.g1.t1 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE