PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
ocimum_basilicum_1102.g6.t1 Alkaloid IO medium borderline
ocimum_basilicum_1130.g1.t1 Alkaloid IO medium borderline
ocimum_basilicum_1159.g5.t1 Alkaloid IO low borderline
ocimum_basilicum_1717.g4.t1 Alkaloid IO low borderline
ocimum_basilicum_1810.g32.t1 Alkaloid IO low borderline
ocimum_basilicum_1868.g69.t1 Alkaloid IO low borderline
ocimum_basilicum_1874.g29.t1 Alkaloid IO medium borderline
ocimum_basilicum_1925.g20.t1 Alkaloid IO medium borderline
ocimum_basilicum_1926.g40.t1 Alkaloid IO low borderline
ocimum_basilicum_1945.g15.t1 Alkaloid IO medium borderline
ocimum_basilicum_230828.g1.t1 Alkaloid IO low borderline
ocimum_basilicum_303144.g1.t1 Alkaloid IO medium borderline
ocimum_basilicum_303245.g2.t1 Alkaloid IO medium borderline
ocimum_basilicum_337233.g4.t1 Alkaloid IO medium borderline
ocimum_basilicum_343721.g1.t1 Alkaloid IO medium borderline
ocimum_basilicum_370163.g1.t1 Alkaloid IO low borderline
ocimum_basilicum_371953.g2.t1 Alkaloid IO medium borderline
ocimum_basilicum_373898.g4.t1 Alkaloid IO low borderline
ocimum_basilicum_376328.g8.t1 Alkaloid IO medium borderline
ocimum_basilicum_378287.g5.t1 Alkaloid IO low borderline
ocimum_basilicum_378681.g6.t1 Alkaloid IO medium borderline
ocimum_basilicum_379501.g11.t1 Alkaloid IO medium borderline
ocimum_basilicum_379558.g12.t1 Alkaloid IO medium borderline
ocimum_basilicum_380227.g20.t1 Alkaloid IO medium borderline
ocimum_basilicum_380227.g21.t1 Alkaloid IO medium borderline
ocimum_basilicum_380227.g25.t1 Alkaloid IO medium borderline
ocimum_basilicum_380227.g26.t1 Alkaloid IO medium borderline
ocimum_basilicum_380367.g38.t1 Alkaloid IO medium borderline
ocimum_basilicum_381419.g18.t1 Alkaloid IO medium borderline
ocimum_basilicum_382462.g20.t1 Alkaloid IO medium borderline
ocimum_basilicum_382614.g12.t1 Alkaloid IO medium borderline
ocimum_basilicum_382614.g20.t1 Alkaloid IO medium borderline
ocimum_basilicum_382836.g5.t1 Alkaloid IO medium borderline
ocimum_basilicum_383013.g73.t1 Alkaloid IO medium borderline
ocimum_basilicum_383013.g82.t1 Alkaloid IO medium pass
ocimum_basilicum_383210.g2.t1 Alkaloid IO medium pass
ocimum_basilicum_383292.g23.t1 Alkaloid IO medium borderline
ocimum_basilicum_383772.g69.t1 Alkaloid IO medium borderline
ocimum_basilicum_384278.g4.t1 Alkaloid IO medium borderline
ocimum_basilicum_384485.g1.t1 Alkaloid IO medium borderline
ocimum_basilicum_384984.g75.t1 Alkaloid IO medium borderline
ocimum_basilicum_385027.g12.t1 Alkaloid IO medium borderline
ocimum_basilicum_385027.g14.t1 Alkaloid IO medium borderline
ocimum_basilicum_385027.g8.t1 Alkaloid IO medium borderline
ocimum_basilicum_385027.g9.t1 Alkaloid IO high pass
ocimum_basilicum_385143.g27.t1 Alkaloid IO medium borderline
ocimum_basilicum_385199.g112.t1 Alkaloid IO medium borderline
ocimum_basilicum_385220.g6.t1 Alkaloid IO medium pass
ocimum_basilicum_385488.g12.t1 Alkaloid IO low borderline
ocimum_basilicum_386100.g38.t1 Alkaloid IO medium pass