PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_386123.g32.t1 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_386161.g26.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_386161.g27.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_447.g65.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_447.g66.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_447.g67.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_453.g68.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_453.g69.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_455.g117.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_456.g115.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_466488.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_466489.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_491811.g1.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_501078.g1.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_506.g138.t1 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_506.g20.t1 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_506.g21.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_506.g22.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_506.g23.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_507.g9.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_515.g91.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_558.g149.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_569.g108.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_569996.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_569997.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_660.g78.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_676.g1.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_676.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_676.g4.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_676.g6.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_690.g3.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
ocimum_basilicum_703.g30.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_703.g31.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_703.g32.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_703.g33.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_708.g129.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
ocimum_basilicum_712.g94.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_724.g31.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_731.g53.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_747.g54.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_748.g62.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_750.g19.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_750.g22.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_750.g23.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
ocimum_basilicum_750.g26.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_750.g27.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_813.g10.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_813.g12.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_813.g14.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
ocimum_basilicum_821.g5.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH