PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_382992.g92.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g94.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g95.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g97.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g98.t1 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_382992.g99.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_383245.g85.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_383245.g87.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_383270.g58.t1 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
ocimum_basilicum_383347.g7.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_383552.g62.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_383573.g29.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_384460.g33.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_384815.g104.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_385855.g28.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_385855.g31.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_385855.g33.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_385938.g100.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_386072.g137.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_448086.g1.t1 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_basilicum_468.g100.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_469.g68.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_553.g42.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_654.g150.t1 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
ocimum_basilicum_698.g40.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_707.g75.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_747.g104.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_basilicum_786.g35.t1 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA