PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
ocimum_basilicum_380201.g1.t1 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
ocimum_basilicum_380370.g27.t1 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
ocimum_basilicum_380434.g9.t1 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
ocimum_basilicum_380517.g11.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_381051.g40.t1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
ocimum_basilicum_381804.g66.t1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
ocimum_basilicum_382139.g3.t1 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_382143.g19.t1 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
ocimum_basilicum_382168.g25.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_382213.g12.t1 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
ocimum_basilicum_382314.g5.t1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_382361.g1.t1 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
ocimum_basilicum_382524.g4.t1 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
ocimum_basilicum_382584.g2.t1 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
ocimum_basilicum_382666.g2.t1 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
ocimum_basilicum_382666.g9.t1 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
ocimum_basilicum_382794.g15.t1 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
ocimum_basilicum_382931.g53.t1 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
ocimum_basilicum_382938.g4.t1 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
ocimum_basilicum_382938.g56.t1 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
ocimum_basilicum_382985.g35.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_383116.g2.t1 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ocimum_basilicum_383122.g7.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_383155.g2.t1 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
ocimum_basilicum_383207.g3.t1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
ocimum_basilicum_383443.g82.t1 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
ocimum_basilicum_383613.g19.t1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ocimum_basilicum_383631.g7.t1 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_383631.g8.t1 Alkaloid NMT low borderline NMT__00049__sp_Q93YF5_SUVH1_TOBAC
ocimum_basilicum_383645.g4.t1 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
ocimum_basilicum_383706.g27.t1 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
ocimum_basilicum_383802.g16.t1 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
ocimum_basilicum_383891.g1.t1 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
ocimum_basilicum_384065.g15.t1 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
ocimum_basilicum_384399.g84.t1 Alkaloid NMT low borderline NMT__00060__sp_Q9MAT5_ANM10_ARATH
ocimum_basilicum_384399.g85.t1 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
ocimum_basilicum_384444.g3.t1 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
ocimum_basilicum_385170.g23.t1 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
ocimum_basilicum_385300.g18.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
ocimum_basilicum_385428.g22.t1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
ocimum_basilicum_385490.g29.t1 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
ocimum_basilicum_385490.g35.t1 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
ocimum_basilicum_385671.g52.t1 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
ocimum_basilicum_385749.g1.t1 Alkaloid NMT low borderline NMT__00034__sp_Q5VN06_CLF_ORYSJ
ocimum_basilicum_385882.g47.t1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
ocimum_basilicum_385960.g40.t1 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
ocimum_basilicum_385998.g3.t1 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
ocimum_basilicum_386162.g1.t1 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
ocimum_basilicum_392781.g3.t1 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
ocimum_basilicum_395096.g2.t1 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH