PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
ocimum_basilicum_379021.g8.t1 Alkaloid T16H medium borderline
ocimum_basilicum_380370.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_381158.g3.t1 Alkaloid T16H low borderline
ocimum_basilicum_381419.g16.t1 Alkaloid T16H medium borderline
ocimum_basilicum_381419.g26.t1 Alkaloid T16H medium borderline
ocimum_basilicum_381419.g31.t1 Alkaloid T16H medium borderline
ocimum_basilicum_381828.g43.t1 Alkaloid T16H medium borderline
ocimum_basilicum_381885.g8.t1 Alkaloid T16H medium borderline
ocimum_basilicum_382614.g9.t1 Alkaloid T16H medium borderline
ocimum_basilicum_382655.g31.t1 Alkaloid T16H medium borderline
ocimum_basilicum_382790.g82.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383069.g14.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383520.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383613.g27.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383630.g2.t1 Alkaloid T16H low borderline
ocimum_basilicum_383637.g11.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383637.g13.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383639.g16.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383641.g32.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383706.g10.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383706.g9.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383718.g5.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383772.g68.t1 Alkaloid T16H medium borderline
ocimum_basilicum_383854.g2.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384397.g42.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384464.g12.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384464.g23.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384464.g8.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384868.g31.t1 Alkaloid T16H medium borderline
ocimum_basilicum_384868.g34.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385316.g59.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385320.g59.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385331.g11.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385331.g17.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385346.g195.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385370.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385490.g5.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385524.g26.t1 Alkaloid T16H low borderline
ocimum_basilicum_385708.g44.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385708.g50.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385763.g14.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385803.g31.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385882.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385991.g30.t1 Alkaloid T16H medium borderline
ocimum_basilicum_385991.g34.t1 Alkaloid T16H medium borderline
ocimum_basilicum_386072.g44.t1 Alkaloid T16H medium borderline
ocimum_basilicum_386156.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_386163.g28.t1 Alkaloid T16H low borderline
ocimum_basilicum_397556.g1.t1 Alkaloid T16H medium borderline
ocimum_basilicum_428949.g3.t1 Alkaloid T16H medium borderline